Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.37■■□□□ 1.01
RFC3P40938 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.37■■□□□ 1.01
RFC3P40938 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFC3P40938 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFC3P40938 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFC3P40938 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFC3P40938 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RFC3P40938 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.35■■□□□ 1.01
RFC3P40938 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.35■■□□□ 1.01
RFC3P40938 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.35■■□□□ 1.01
RFC3P40938 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.35■■□□□ 1.01
RFC3P40938 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.35■■□□□ 1.01
RFC3P40938 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFC3P40938 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFC3P40938 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFC3P40938 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RFC3P40938 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFC3P40938 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.34■■□□□ 1.01
RFC3P40938 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RFC3P40938 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RFC3P40938 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFC3P40938 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFC3P40938 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.34■■□□□ 1.01
RFC3P40938 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFC3P40938 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.33■■□□□ 1.01
RFC3P40938 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RFC3P40938 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RFC3P40938 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFC3P40938 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.32■■□□□ 1
RFC3P40938 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.32■■□□□ 1
RFC3P40938 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFC3P40938 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RFC3P40938 AF131216.4-201ENST00000638924 1588 ntBASIC21.31■■□□□ 1
RFC3P40938 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFC3P40938 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.31■■□□□ 1
RFC3P40938 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFC3P40938 AC090877.2-201ENST00000558441 1738 ntBASIC21.31■■□□□ 1
RFC3P40938 AC008406.3-201ENST00000620001 1374 ntBASIC21.31■■□□□ 1
RFC3P40938 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RFC3P40938 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
RFC3P40938 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.3■■□□□ 1
RFC3P40938 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.3■■□□□ 1
RFC3P40938 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.3■■□□□ 1
RFC3P40938 MTDHP2-201ENST00000601468 714 ntBASIC21.3■■□□□ 1
RFC3P40938 AC010997.5-201ENST00000609182 354 ntBASIC21.3■■□□□ 1
RFC3P40938 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RFC3P40938 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.29■■□□□ 1
RFC3P40938 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.29■■□□□ 1
RFC3P40938 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFC3P40938 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.29■■□□□ 1
RFC3P40938 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.29■■□□□ 1
RFC3P40938 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFC3P40938 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.28■■□□□ 1
RFC3P40938 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.28■■□□□ 1
RFC3P40938 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFC3P40938 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.28■■□□□ 1
RFC3P40938 AC091060.1-201ENST00000623524 1766 ntBASIC21.28■■□□□ 1
RFC3P40938 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFC3P40938 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC3P40938 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFC3P40938 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC3P40938 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RFC3P40938 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RFC3P40938 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.27■■□□□ 1
RFC3P40938 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.27■■□□□ 1
RFC3P40938 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.27■■□□□ 1
RFC3P40938 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFC3P40938 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC3P40938 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC3P40938 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RFC3P40938 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC3P40938 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC3P40938 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC3P40938 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC3P40938 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC3P40938 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC3P40938 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC3P40938 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC3P40938 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC3P40938 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.25■□□□□ 0.99
RFC3P40938 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC3P40938 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC3P40938 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC3P40938 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC3P40938 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFC3P40938 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RFC3P40938 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RFC3P40938 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC3P40938 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC3P40938 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFC3P40938 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC3P40938 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.24■□□□□ 0.99
RFC3P40938 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.24■□□□□ 0.99
RFC3P40938 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFC3P40938 DUSP8P4-201ENST00000399538 1761 ntBASIC21.23■□□□□ 0.99
RFC3P40938 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC3P40938 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.23■□□□□ 0.99
RFC3P40938 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFC3P40938 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
RFC3P40938 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms