Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LCN1P31025 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LCN1P31025 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.55■■□□□ 1.04
LCN1P31025 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.55■■□□□ 1.04
LCN1P31025 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LCN1P31025 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LCN1P31025 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.55■■□□□ 1.04
LCN1P31025 AC090877.2-201ENST00000558441 1738 ntBASIC21.55■■□□□ 1.04
LCN1P31025 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.55■■□□□ 1.04
LCN1P31025 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LCN1P31025 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.54■■□□□ 1.04
LCN1P31025 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.53■■□□□ 1.04
LCN1P31025 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LCN1P31025 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LCN1P31025 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
LCN1P31025 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LCN1P31025 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.53■■□□□ 1.04
LCN1P31025 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.53■■□□□ 1.04
LCN1P31025 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCN1P31025 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCN1P31025 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LCN1P31025 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LCN1P31025 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCN1P31025 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.52■■□□□ 1.04
LCN1P31025 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
LCN1P31025 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCN1P31025 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.52■■□□□ 1.04
LCN1P31025 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.52■■□□□ 1.04
LCN1P31025 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCN1P31025 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCN1P31025 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LCN1P31025 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.52■■□□□ 1.03
LCN1P31025 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCN1P31025 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LCN1P31025 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.51■■□□□ 1.03
LCN1P31025 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCN1P31025 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LCN1P31025 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCN1P31025 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.5■■□□□ 1.03
LCN1P31025 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCN1P31025 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LCN1P31025 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LCN1P31025 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.5■■□□□ 1.03
LCN1P31025 MIR4508-201ENST00000584178 70 ntBASIC21.5■■□□□ 1.03
LCN1P31025 AC010980.1-201ENST00000587192 1142 ntBASIC21.5■■□□□ 1.03
LCN1P31025 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCN1P31025 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LCN1P31025 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCN1P31025 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCN1P31025 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LCN1P31025 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCN1P31025 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCN1P31025 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LCN1P31025 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LCN1P31025 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.49■■□□□ 1.03
LCN1P31025 PVT1_1.1-201ENST00000615125 194 ntBASIC21.49■■□□□ 1.03
LCN1P31025 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LCN1P31025 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LCN1P31025 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.49■■□□□ 1.03
LCN1P31025 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LCN1P31025 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
LCN1P31025 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LCN1P31025 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LCN1P31025 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.48■■□□□ 1.03
LCN1P31025 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LCN1P31025 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.48■■□□□ 1.03
LCN1P31025 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LCN1P31025 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.48■■□□□ 1.03
LCN1P31025 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.48■■□□□ 1.03
LCN1P31025 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
LCN1P31025 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LCN1P31025 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LCN1P31025 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LCN1P31025 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LCN1P31025 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LCN1P31025 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LCN1P31025 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LCN1P31025 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LCN1P31025 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LCN1P31025 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LCN1P31025 KRT18P24-201ENST00000344739 1156 ntBASIC21.47■■□□□ 1.03
LCN1P31025 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LCN1P31025 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LCN1P31025 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LCN1P31025 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LCN1P31025 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.47■■□□□ 1.03
LCN1P31025 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LCN1P31025 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LCN1P31025 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
LCN1P31025 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.46■■□□□ 1.03
LCN1P31025 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.46■■□□□ 1.03
LCN1P31025 AC141586.4-201ENST00000624558 1573 ntBASIC21.46■■□□□ 1.03
LCN1P31025 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LCN1P31025 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
LCN1P31025 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.03
LCN1P31025 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.45■■□□□ 1.02
LCN1P31025 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LCN1P31025 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LCN1P31025 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
LCN1P31025 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms