Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YMR178WYMR178W 825 nt6.8□□□□□ -1.32
MSH3P25336 YBL112CYBL112C 318 nt6.8□□□□□ -1.32
MSH3P25336 YOL162WYOL162W 648 nt6.8□□□□□ -1.32
MSH3P25336 MRP51YPL118W 1035 nt6.8□□□□□ -1.32
MSH3P25336 IME2YJL106W 1938 nt6.8□□□□□ -1.32
MSH3P25336 PAP2YOL115W 1755 nt6.8□□□□□ -1.32
MSH3P25336 YCK1YHR135C 1617 nt6.79□□□□□ -1.32
MSH3P25336 CRF1YDR223W 1404 nt6.79□□□□□ -1.32
MSH3P25336 GAA1YLR088W 1845 nt6.79□□□□□ -1.32
MSH3P25336 DEF1YKL054C 2217 nt6.79□□□□□ -1.32
MSH3P25336 IMG1YCR046C 510 nt6.79□□□□□ -1.32
MSH3P25336 PFA5YDR459C 1125 nt6.79□□□□□ -1.32
MSH3P25336 AIM20YIL158W 615 nt6.79□□□□□ -1.32
MSH3P25336 RPS28AYOR167C 204 nt6.79□□□□□ -1.32
MSH3P25336 RIX7YLL034C 2514 nt6.79□□□□□ -1.32
MSH3P25336 YHL017WYHL017W 1599 nt6.78□□□□□ -1.32
MSH3P25336 YEA4YEL004W 1029 nt6.78□□□□□ -1.32
MSH3P25336 NVJ1YHR195W 966 nt6.78□□□□□ -1.32
MSH3P25336 MND2YIR025W 1107 nt6.78□□□□□ -1.32
MSH3P25336 YML083CYML083C 1257 nt6.78□□□□□ -1.32
MSH3P25336 YMR252CYMR252C 405 nt6.78□□□□□ -1.32
MSH3P25336 SCP1YOR367W 603 nt6.78□□□□□ -1.32
MSH3P25336 TAE1YBR261C 699 nt6.78□□□□□ -1.32
MSH3P25336 ILV1YER086W 1731 nt6.78□□□□□ -1.32
MSH3P25336 YDR124WYDR124W 975 nt6.77□□□□□ -1.33
MSH3P25336 SDH4YDR178W 546 nt6.77□□□□□ -1.33
MSH3P25336 MPC2YHR162W 390 nt6.77□□□□□ -1.33
MSH3P25336 YJL171CYJL171C 1191 nt6.77□□□□□ -1.33
MSH3P25336 ICT1YLR099C 1185 nt6.77□□□□□ -1.33
MSH3P25336 YBL029WYBL029W 1131 nt6.77□□□□□ -1.33
MSH3P25336 THI80YOR143C 960 nt6.77□□□□□ -1.33
MSH3P25336 VPS5YOR069W 2028 nt6.77□□□□□ -1.33
MSH3P25336 PTM1YKL039W 1572 nt6.77□□□□□ -1.33
MSH3P25336 GPB2YAL056W 2643 nt6.77□□□□□ -1.33
MSH3P25336 KAR5YMR065W 1515 nt6.76□□□□□ -1.33
MSH3P25336 PCS60YBR222C 1632 nt6.76□□□□□ -1.33
MSH3P25336 MCM6YGL201C 3054 nt6.76□□□□□ -1.33
MSH3P25336 RNR3YIL066C 2610 nt6.76□□□□□ -1.33
MSH3P25336 UBC5YDR059C 447 nt6.76□□□□□ -1.33
MSH3P25336 YDR249CYDR249C 1122 nt6.76□□□□□ -1.33
MSH3P25336 YKL153WYKL153W 510 nt6.76□□□□□ -1.33
MSH3P25336 CLB2YPR119W 1476 nt6.76□□□□□ -1.33
MSH3P25336 NOP7YGR103W 1818 nt6.76□□□□□ -1.33
MSH3P25336 SUB2YDL084W 1341 nt6.76□□□□□ -1.33
MSH3P25336 PGK1YCR012W 1251 nt6.75□□□□□ -1.33
MSH3P25336 YGL218WYGL218W 651 nt6.75□□□□□ -1.33
MSH3P25336 POR2YIL114C 846 nt6.75□□□□□ -1.33
MSH3P25336 PRE3YJL001W 648 nt6.75□□□□□ -1.33
MSH3P25336 YJR096WYJR096W 849 nt6.75□□□□□ -1.33
MSH3P25336 YMR119W-AYMR119W-A 375 nt6.75□□□□□ -1.33
MSH3P25336 MTF1YMR228W 1026 nt6.75□□□□□ -1.33
MSH3P25336 RPC19YNL113W 429 nt6.75□□□□□ -1.33
MSH3P25336 VPS36YLR417W 1701 nt6.75□□□□□ -1.33
MSH3P25336 YJL047C-AYJL047C-A 135 nt6.74□□□□□ -1.33
MSH3P25336 KRE9YJL174W 831 nt6.74□□□□□ -1.33
MSH3P25336 YAL064WYAL064W 285 nt6.74□□□□□ -1.33
MSH3P25336 ATG29YPL166W 642 nt6.74□□□□□ -1.33
MSH3P25336 TIF5YPR041W 1218 nt6.74□□□□□ -1.33
MSH3P25336 MRL1YPR079W 1146 nt6.74□□□□□ -1.33
MSH3P25336 YPR123CYPR123C 435 nt6.74□□□□□ -1.33
MSH3P25336 PEX32YBR168W 1242 nt6.74□□□□□ -1.33
MSH3P25336 YPR196WYPR196W 1413 nt6.74□□□□□ -1.33
MSH3P25336 GEX1YCL073C 1848 nt6.73□□□□□ -1.33
MSH3P25336 GEX2YKR106W 1848 nt6.73□□□□□ -1.33
MSH3P25336 GPA2YER020W 1350 nt6.73□□□□□ -1.33
MSH3P25336 OPI7YDR360W 435 nt6.73□□□□□ -1.33
MSH3P25336 ELF1YKL160W 438 nt6.73□□□□□ -1.33
MSH3P25336 TFA2YKR062W 987 nt6.73□□□□□ -1.33
MSH3P25336 GEP5YLR091W 882 nt6.73□□□□□ -1.33
MSH3P25336 YML094C-AYML094C-A 402 nt6.73□□□□□ -1.33
MSH3P25336 HXT17YNR072W 1695 nt6.73□□□□□ -1.33
MSH3P25336 TED1YIL039W 1422 nt6.73□□□□□ -1.33
MSH3P25336 RVB2YPL235W 1416 nt6.73□□□□□ -1.33
MSH3P25336 YIR007WYIR007W 2295 nt6.73□□□□□ -1.33
MSH3P25336 GUD1YDL238C 1470 nt6.73□□□□□ -1.33
MSH3P25336 WHI2YOR043W 1461 nt6.73□□□□□ -1.33
MSH3P25336 UPS3YDR185C 540 nt6.72□□□□□ -1.33
MSH3P25336 PMP3YDR276C 168 nt6.72□□□□□ -1.33
MSH3P25336 COG7YGL005C 840 nt6.72□□□□□ -1.33
MSH3P25336 SPO74YGL170C 1242 nt6.72□□□□□ -1.33
MSH3P25336 YGR273CYGR273C 525 nt6.72□□□□□ -1.33
MSH3P25336 VPS24YKL041W 675 nt6.72□□□□□ -1.33
MSH3P25336 URA4YLR420W 1095 nt6.72□□□□□ -1.33
MSH3P25336 YBL036CYBL036C 774 nt6.72□□□□□ -1.33
MSH3P25336 AAH1YNL141W 1044 nt6.72□□□□□ -1.33
MSH3P25336 SCS22YBL091C-A 528 nt6.72□□□□□ -1.33
MSH3P25336 YOR169CYOR169C 465 nt6.72□□□□□ -1.33
MSH3P25336 MET16YPR167C 786 nt6.72□□□□□ -1.33
MSH3P25336 IFA38YBR159W 1044 nt6.72□□□□□ -1.33
MSH3P25336 YBR292CYBR292C 372 nt6.72□□□□□ -1.33
MSH3P25336 DXO1YDR370C 1329 nt6.72□□□□□ -1.33
MSH3P25336 CDC1YDR182W 1476 nt6.72□□□□□ -1.33
MSH3P25336 DBP9YLR276C 1785 nt6.72□□□□□ -1.33
MSH3P25336 ALD6YPL061W 1503 nt6.71□□□□□ -1.33
MSH3P25336 MKK2YPL140C 1521 nt6.71□□□□□ -1.33
MSH3P25336 IMP3YHR148W 552 nt6.71□□□□□ -1.34
MSH3P25336 ARG3YJL088W 1017 nt6.71□□□□□ -1.34
MSH3P25336 AAT2YLR027C 1257 nt6.71□□□□□ -1.34
MSH3P25336 RRI1YDL216C 1323 nt6.71□□□□□ -1.34
MSH3P25336 CNE1YAL058W 1509 nt6.71□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 37.1 ms