Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 YKL223WYKL223W 333 nt5.7□□□□□ -1.5
VPS3P23643 GSY2YLR258W 2118 nt5.7□□□□□ -1.5
VPS3P23643 ENV9YOR246C 993 nt5.7□□□□□ -1.5
VPS3P23643 YPR195CYPR195C 330 nt5.7□□□□□ -1.5
VPS3P23643 VAN1YML115C 1608 nt5.7□□□□□ -1.5
VPS3P23643 QDR3YBR043C 2070 nt5.7□□□□□ -1.5
VPS3P23643 UTP7YER082C 1665 nt5.69□□□□□ -1.5
VPS3P23643 TBF1YPL128C 1689 nt5.69□□□□□ -1.5
VPS3P23643 SSK22YCR073C 3996 nt5.69□□□□□ -1.5
VPS3P23643 ABZ1YNR033W 2364 nt5.69□□□□□ -1.5
VPS3P23643 YPL062WYPL062W 405 nt5.69□□□□□ -1.5
VPS3P23643 UBC4YBR082C 447 nt5.69□□□□□ -1.5
VPS3P23643 YFR052C-AYFR052C-A 306 nt5.68□□□□□ -1.5
VPS3P23643 SCW4YGR279C 1161 nt5.68□□□□□ -1.5
VPS3P23643 POM33YLL023C 840 nt5.68□□□□□ -1.5
VPS3P23643 ODC2YOR222W 924 nt5.68□□□□□ -1.5
VPS3P23643 TOS4YLR183C 1470 nt5.68□□□□□ -1.5
VPS3P23643 RIM101YHL027W 1878 nt5.68□□□□□ -1.5
VPS3P23643 PHO8YDR481C 1701 nt5.68□□□□□ -1.5
VPS3P23643 HIR1YBL008W 2523 nt5.68□□□□□ -1.5
VPS3P23643 NDC1YML031W 1968 nt5.67□□□□□ -1.5
VPS3P23643 VPS72YDR485C 2388 nt5.67□□□□□ -1.5
VPS3P23643 YHR045WYHR045W 1683 nt5.67□□□□□ -1.5
VPS3P23643 POR1YNL055C 852 nt5.67□□□□□ -1.5
VPS3P23643 PFA3YNL326C 1011 nt5.67□□□□□ -1.5
VPS3P23643 YHR127WYHR127W 732 nt5.66□□□□□ -1.5
VPS3P23643 PDR16YNL231C 1056 nt5.66□□□□□ -1.5
VPS3P23643 RBD2YPL246C 789 nt5.66□□□□□ -1.5
VPS3P23643 TAX4YJL083W 1815 nt5.65□□□□□ -1.5
VPS3P23643 YLR283WYLR283W 945 nt5.65□□□□□ -1.5
VPS3P23643 YLR317WYLR317W 435 nt5.65□□□□□ -1.5
VPS3P23643 DPH2YKL191W 1605 nt5.65□□□□□ -1.51
VPS3P23643 YML131WYML131W 1098 nt5.64□□□□□ -1.51
VPS3P23643 MKC7YDR144C 1791 nt5.64□□□□□ -1.51
VPS3P23643 SPC97YHR172W 2472 nt5.63□□□□□ -1.51
VPS3P23643 IPI1YHR085W 1005 nt5.63□□□□□ -1.51
VPS3P23643 CBF1YJR060W 1056 nt5.63□□□□□ -1.51
VPS3P23643 NRM1YNR009W 750 nt5.63□□□□□ -1.51
VPS3P23643 BAP2YBR068C 1830 nt5.62□□□□□ -1.51
VPS3P23643 YDR541CYDR541C 1035 nt5.62□□□□□ -1.51
VPS3P23643 TDH3YGR192C 999 nt5.62□□□□□ -1.51
VPS3P23643 PEX32YBR168W 1242 nt5.62□□□□□ -1.51
VPS3P23643 ICE2YIL090W 1476 nt5.62□□□□□ -1.51
VPS3P23643 MAL11YGR289C 1851 nt5.62□□□□□ -1.51
VPS3P23643 DRS1YLL008W 2259 nt5.62□□□□□ -1.51
VPS3P23643 ACF2YLR144C 2340 nt5.62□□□□□ -1.51
VPS3P23643 PDE1YGL248W 1110 nt5.61□□□□□ -1.51
VPS3P23643 DED81YHR019C 1665 nt5.61□□□□□ -1.51
VPS3P23643 CTR2YHR175W 570 nt5.61□□□□□ -1.51
VPS3P23643 SFC1YJR095W 969 nt5.61□□□□□ -1.51
VPS3P23643 JJJ3YJR097W 519 nt5.61□□□□□ -1.51
VPS3P23643 YKL107WYKL107W 930 nt5.61□□□□□ -1.51
VPS3P23643 RMA1YKL132C 1293 nt5.61□□□□□ -1.51
VPS3P23643 DFG5YMR238W 1377 nt5.61□□□□□ -1.51
VPS3P23643 ETR1YBR026C 1143 nt5.61□□□□□ -1.51
VPS3P23643 RAD53YPL153C 2466 nt5.61□□□□□ -1.51
VPS3P23643 BBP1YPL255W 1158 nt5.61□□□□□ -1.51
VPS3P23643 BUD14YAR014C 2130 nt5.6□□□□□ -1.51
VPS3P23643 CLP1YOR250C 1338 nt5.6□□□□□ -1.51
VPS3P23643 SIP2YGL208W 1248 nt5.6□□□□□ -1.51
VPS3P23643 YJL068CYJL068C 900 nt5.6□□□□□ -1.51
VPS3P23643 ATP14YLR295C 375 nt5.6□□□□□ -1.51
VPS3P23643 snR32snR32 188 nt5.6□□□□□ -1.51
VPS3P23643 GYP1YOR070C 1914 nt5.6□□□□□ -1.51
VPS3P23643 ENT2YLR206W 1842 nt5.6□□□□□ -1.51
VPS3P23643 UTP18YJL069C 1785 nt5.6□□□□□ -1.51
VPS3P23643 YAP1YML007W 1953 nt5.59□□□□□ -1.51
VPS3P23643 VCX1YDL128W 1236 nt5.59□□□□□ -1.51
VPS3P23643 RER2YBR002C 861 nt5.59□□□□□ -1.51
VPS3P23643 ENP1YBR247C 1452 nt5.58□□□□□ -1.52
VPS3P23643 MTQ2YDR140W 666 nt5.58□□□□□ -1.52
VPS3P23643 tX(XXX)DtX(XXX)D 100 nt5.58□□□□□ -1.52
VPS3P23643 YJL193WYJL193W 1209 nt5.58□□□□□ -1.52
VPS3P23643 HSF1YGL073W 2502 nt5.58□□□□□ -1.52
VPS3P23643 VTC2YFL004W 2487 nt5.58□□□□□ -1.52
VPS3P23643 THI21YPL258C 1656 nt5.57□□□□□ -1.52
VPS3P23643 IES1YFL013C 2079 nt5.57□□□□□ -1.52
VPS3P23643 MTC1YJL123C 1437 nt5.57□□□□□ -1.52
VPS3P23643 RRP45YDR280W 918 nt5.56□□□□□ -1.52
VPS3P23643 FHN1YGR131W 525 nt5.56□□□□□ -1.52
VPS3P23643 PRP45YAL032C 1140 nt5.56□□□□□ -1.52
VPS3P23643 HXT5YHR096C 1779 nt5.56□□□□□ -1.52
VPS3P23643 ULA1YPL003W 1389 nt5.55□□□□□ -1.52
VPS3P23643 ASH1YKL185W 1767 nt5.55□□□□□ -1.52
VPS3P23643 PHM8YER037W 966 nt5.55□□□□□ -1.52
VPS3P23643 tR(ACG)JtR(ACG)J 73 nt5.55□□□□□ -1.52
VPS3P23643 VMA13YPR036W 1437 nt5.55□□□□□ -1.52
VPS3P23643 YFL034WYFL034W 3222 nt5.55□□□□□ -1.52
VPS3P23643 ACS2YLR153C 2052 nt5.54□□□□□ -1.52
VPS3P23643 GDB1YPR184W 4611 nt5.54□□□□□ -1.52
VPS3P23643 PIF1YML061C 2580 nt5.54□□□□□ -1.52
VPS3P23643 NOP7YGR103W 1818 nt5.54□□□□□ -1.52
VPS3P23643 FAF1YIL019W 1041 nt5.54□□□□□ -1.52
VPS3P23643 YIL060WYIL060W 435 nt5.54□□□□□ -1.52
VPS3P23643 YAL056C-AYAL056C-A 351 nt5.54□□□□□ -1.52
VPS3P23643 OST3YOR085W 1053 nt5.54□□□□□ -1.52
VPS3P23643 AIM17YHL021C 1398 nt5.54□□□□□ -1.52
VPS3P23643 MNN2YBR015C 1794 nt5.53□□□□□ -1.52
VPS3P23643 PHO86YJL117W 936 nt5.53□□□□□ -1.52
VPS3P23643 YNR042WYNR042W 429 nt5.53□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms