Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 ATG20YDL113C 1923 nt7.8□□□□□ -1.16
TY2B-LR1P0C2J3 KIP2YPL155C 2121 nt7.8□□□□□ -1.16
TY2B-LR1P0C2J3 MKS1YNL076W 1755 nt7.8□□□□□ -1.16
TY2B-LR1P0C2J3 SKI2YLR398C 3864 nt7.79□□□□□ -1.16
TY2B-LR1P0C2J3 YML057C-AYML057C-A 390 nt7.79□□□□□ -1.16
TY2B-LR1P0C2J3 YDR514CYDR514C 1452 nt7.79□□□□□ -1.16
TY2B-LR1P0C2J3 SWI1YPL016W 3945 nt7.79□□□□□ -1.16
TY2B-LR1P0C2J3 YLR157W-DYLR157W-D 213 nt7.79□□□□□ -1.16
TY2B-LR1P0C2J3 MAP2YBL091C 1266 nt7.79□□□□□ -1.16
TY2B-LR1P0C2J3 YPR098CYPR098C 486 nt7.79□□□□□ -1.16
TY2B-LR1P0C2J3 ECM3YOR092W 1842 nt7.78□□□□□ -1.16
TY2B-LR1P0C2J3 ATE1YGL017W 1512 nt7.78□□□□□ -1.16
TY2B-LR1P0C2J3 YAR023CYAR023C 540 nt7.78□□□□□ -1.16
TY2B-LR1P0C2J3 CIN5YOR028C 888 nt7.78□□□□□ -1.16
TY2B-LR1P0C2J3 SIF2YBR103W 1608 nt7.78□□□□□ -1.16
TY2B-LR1P0C2J3 NAG1YGR031C-A 492 nt7.77□□□□□ -1.17
TY2B-LR1P0C2J3 NIT2YJL126W 924 nt7.77□□□□□ -1.17
TY2B-LR1P0C2J3 NMA1YLR328W 1206 nt7.77□□□□□ -1.17
TY2B-LR1P0C2J3 YNL217WYNL217W 981 nt7.77□□□□□ -1.17
TY2B-LR1P0C2J3 ERD1YDR414C 1089 nt7.76□□□□□ -1.17
TY2B-LR1P0C2J3 APS1YLR170C 471 nt7.76□□□□□ -1.17
TY2B-LR1P0C2J3 RPL15BYMR121C 615 nt7.76□□□□□ -1.17
TY2B-LR1P0C2J3 YNL040WYNL040W 1371 nt7.76□□□□□ -1.17
TY2B-LR1P0C2J3 YDR133CYDR133C 336 nt7.76□□□□□ -1.17
TY2B-LR1P0C2J3 YKE4YIL023C 1041 nt7.76□□□□□ -1.17
TY2B-LR1P0C2J3 HXT5YHR096C 1779 nt7.76□□□□□ -1.17
TY2B-LR1P0C2J3 KTI12YKL110C 942 nt7.75□□□□□ -1.17
TY2B-LR1P0C2J3 RRT2YBR246W 1164 nt7.75□□□□□ -1.17
TY2B-LR1P0C2J3 AZR1YGR224W 1842 nt7.75□□□□□ -1.17
TY2B-LR1P0C2J3 PGA2YNL149C 390 nt7.74□□□□□ -1.17
TY2B-LR1P0C2J3 YIF1YNL263C 945 nt7.74□□□□□ -1.17
TY2B-LR1P0C2J3 CLB1YGR108W 1416 nt7.74□□□□□ -1.17
TY2B-LR1P0C2J3 HIR1YBL008W 2523 nt7.74□□□□□ -1.17
TY2B-LR1P0C2J3 HRR25YPL204W 1485 nt7.74□□□□□ -1.17
TY2B-LR1P0C2J3 PPM1YDR435C 987 nt7.74□□□□□ -1.17
TY2B-LR1P0C2J3 PCL1YNL289W 840 nt7.74□□□□□ -1.17
TY2B-LR1P0C2J3 GLN3YER040W 2193 nt7.73□□□□□ -1.17
TY2B-LR1P0C2J3 HXT3YDR345C 1704 nt7.73□□□□□ -1.17
TY2B-LR1P0C2J3 MMT2YPL224C 1455 nt7.72□□□□□ -1.17
TY2B-LR1P0C2J3 RHO4YKR055W 876 nt7.72□□□□□ -1.17
TY2B-LR1P0C2J3 FUI1YBL042C 1920 nt7.72□□□□□ -1.17
TY2B-LR1P0C2J3 NGR1YBR212W 2019 nt7.72□□□□□ -1.17
TY2B-LR1P0C2J3 FRE6YLL051C 2139 nt7.72□□□□□ -1.17
TY2B-LR1P0C2J3 KNS1YLL019C 2214 nt7.72□□□□□ -1.17
TY2B-LR1P0C2J3 VPS5YOR069W 2028 nt7.72□□□□□ -1.17
TY2B-LR1P0C2J3 YBL044WYBL044W 369 nt7.71□□□□□ -1.17
TY2B-LR1P0C2J3 SNU71YGR013W 1863 nt7.71□□□□□ -1.17
TY2B-LR1P0C2J3 STB3YDR169C 1542 nt7.71□□□□□ -1.18
TY2B-LR1P0C2J3 SCW10YMR305C 1170 nt7.71□□□□□ -1.18
TY2B-LR1P0C2J3 HFI1YPL254W 1467 nt7.71□□□□□ -1.18
TY2B-LR1P0C2J3 MRM2YGL136C 963 nt7.7□□□□□ -1.18
TY2B-LR1P0C2J3 PFA3YNL326C 1011 nt7.7□□□□□ -1.18
TY2B-LR1P0C2J3 snR19snR19 568 nt7.7□□□□□ -1.18
TY2B-LR1P0C2J3 YKR041WYKR041W 753 nt7.69□□□□□ -1.18
TY2B-LR1P0C2J3 NOP16YER002W 696 nt7.69□□□□□ -1.18
TY2B-LR1P0C2J3 YOR024WYOR024W 324 nt7.69□□□□□ -1.18
TY2B-LR1P0C2J3 THP1YOL072W 1368 nt7.68□□□□□ -1.18
TY2B-LR1P0C2J3 SIP2YGL208W 1248 nt7.68□□□□□ -1.18
TY2B-LR1P0C2J3 YHR140WYHR140W 720 nt7.68□□□□□ -1.18
TY2B-LR1P0C2J3 YML101C-AYML101C-A 318 nt7.68□□□□□ -1.18
TY2B-LR1P0C2J3 YNL174WYNL174W 573 nt7.68□□□□□ -1.18
TY2B-LR1P0C2J3 EXO70YJL085W 1872 nt7.68□□□□□ -1.18
TY2B-LR1P0C2J3 KEX2YNL238W 2445 nt7.67□□□□□ -1.18
TY2B-LR1P0C2J3 PDI1YCL043C 1569 nt7.67□□□□□ -1.18
TY2B-LR1P0C2J3 UGA2YBR006W 1494 nt7.66□□□□□ -1.18
TY2B-LR1P0C2J3 BSP1YPR171W 1731 nt7.66□□□□□ -1.18
TY2B-LR1P0C2J3 SKY1YMR216C 2229 nt7.66□□□□□ -1.18
TY2B-LR1P0C2J3 CDC43YGL155W 1131 nt7.66□□□□□ -1.18
TY2B-LR1P0C2J3 TRM10YOL093W 882 nt7.66□□□□□ -1.18
TY2B-LR1P0C2J3 SUP56tL(CAA)A 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 SUP53tL(CAA)C 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 tL(CAA)DtL(CAA)D 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 tL(CAA)G1tL(CAA)G1 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 SUP54tL(CAA)G2 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 tL(CAA)G3tL(CAA)G3 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 tL(CAA)KtL(CAA)K 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 tL(CAA)LtL(CAA)L 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 tL(CAA)MtL(CAA)M 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 tL(CAA)NtL(CAA)N 82 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 YPL191CYPL191C 1083 nt7.65□□□□□ -1.18
TY2B-LR1P0C2J3 SAC6YDR129C 1929 nt7.65□□□□□ -1.19
TY2B-LR1P0C2J3 RHO2YNL090W 579 nt7.64□□□□□ -1.19
TY2B-LR1P0C2J3 HXT15YDL245C 1704 nt7.64□□□□□ -1.19
TY2B-LR1P0C2J3 HXT16YJR158W 1704 nt7.64□□□□□ -1.19
TY2B-LR1P0C2J3 SWI3YJL176C 2478 nt7.64□□□□□ -1.19
TY2B-LR1P0C2J3 YOL075CYOL075C 3885 nt7.64□□□□□ -1.19
TY2B-LR1P0C2J3 DCS2YOR173W 1062 nt7.64□□□□□ -1.19
TY2B-LR1P0C2J3 FOL1YNL256W 2475 nt7.63□□□□□ -1.19
TY2B-LR1P0C2J3 FOX2YKR009C 2703 nt7.63□□□□□ -1.19
TY2B-LR1P0C2J3 POP3YNL282W 588 nt7.63□□□□□ -1.19
TY2B-LR1P0C2J3 HAS1YMR290C 1518 nt7.63□□□□□ -1.19
TY2B-LR1P0C2J3 ATR1YML116W 1629 nt7.63□□□□□ -1.19
TY2B-LR1P0C2J3 ICL2YPR006C 1728 nt7.62□□□□□ -1.19
TY2B-LR1P0C2J3 GLO2YDR272W 825 nt7.62□□□□□ -1.19
TY2B-LR1P0C2J3 YLR364C-AYLR364C-A 123 nt7.62□□□□□ -1.19
TY2B-LR1P0C2J3 ECM23YPL021W 564 nt7.62□□□□□ -1.19
TY2B-LR1P0C2J3 REI1YBR267W 1182 nt7.62□□□□□ -1.19
TY2B-LR1P0C2J3 NSG2YNL156C 900 nt7.61□□□□□ -1.19
TY2B-LR1P0C2J3 HXT4YHR092C 1731 nt7.61□□□□□ -1.19
TY2B-LR1P0C2J3 MAG2YLR427W 2013 nt7.61□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 62.3 ms