Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
LTN1O94822 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
LTN1O94822 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LTN1O94822 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
LTN1O94822 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LTN1O94822 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
LTN1O94822 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
LTN1O94822 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
LTN1O94822 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.51■■■□□ 2.64
LTN1O94822 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
LTN1O94822 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.51■■■□□ 2.64
LTN1O94822 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.64
LTN1O94822 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.51■■■□□ 2.64
LTN1O94822 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
LTN1O94822 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC31.51■■■□□ 2.63
LTN1O94822 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
LTN1O94822 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.51■■■□□ 2.63
LTN1O94822 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
LTN1O94822 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
LTN1O94822 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
LTN1O94822 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LTN1O94822 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LTN1O94822 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
LTN1O94822 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
LTN1O94822 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.49■■■□□ 2.63
LTN1O94822 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
LTN1O94822 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.48■■■□□ 2.63
LTN1O94822 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
LTN1O94822 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.48■■■□□ 2.63
LTN1O94822 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
LTN1O94822 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.48■■■□□ 2.63
LTN1O94822 SUDS3P1-201ENST00000505831 966 ntBASIC31.47■■■□□ 2.63
LTN1O94822 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.47■■■□□ 2.63
LTN1O94822 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LTN1O94822 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.46■■■□□ 2.63
LTN1O94822 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.46■■■□□ 2.63
LTN1O94822 AC106739.1-201ENST00000617035 715 ntBASIC31.45■■■□□ 2.63
LTN1O94822 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
LTN1O94822 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
LTN1O94822 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
LTN1O94822 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.44■■■□□ 2.62
LTN1O94822 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
LTN1O94822 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.44■■■□□ 2.62
LTN1O94822 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
LTN1O94822 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
LTN1O94822 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.44■■■□□ 2.62
LTN1O94822 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
LTN1O94822 RARRES2P6-201ENST00000567333 442 ntBASIC31.43■■■□□ 2.62
LTN1O94822 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.43■■■□□ 2.62
LTN1O94822 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.43■■■□□ 2.62
LTN1O94822 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LTN1O94822 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LTN1O94822 ZNRF2P3-201ENST00000424200 374 ntBASIC31.42■■■□□ 2.62
LTN1O94822 AC133561.4-201ENST00000566112 224 ntBASIC31.42■■■□□ 2.62
LTN1O94822 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LTN1O94822 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.42■■■□□ 2.62
LTN1O94822 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LTN1O94822 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
LTN1O94822 AL031432.3-201ENST00000607698 485 ntBASIC31.41■■■□□ 2.62
LTN1O94822 MIR6722-201ENST00000617286 78 ntBASIC31.41■■■□□ 2.62
LTN1O94822 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.41■■■□□ 2.62
LTN1O94822 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
LTN1O94822 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
LTN1O94822 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
LTN1O94822 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.39■■■□□ 2.62
LTN1O94822 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
LTN1O94822 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
LTN1O94822 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.39■■■□□ 2.62
LTN1O94822 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.61
LTN1O94822 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
LTN1O94822 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.38■■■□□ 2.61
LTN1O94822 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LTN1O94822 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LTN1O94822 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LTN1O94822 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.37■■■□□ 2.61
LTN1O94822 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
LTN1O94822 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.36■■■□□ 2.61
LTN1O94822 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
LTN1O94822 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
LTN1O94822 AC005837.3-201ENST00000612163 286 ntBASIC31.35■■■□□ 2.61
LTN1O94822 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
LTN1O94822 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
LTN1O94822 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
LTN1O94822 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.35■■■□□ 2.61
LTN1O94822 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LTN1O94822 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LTN1O94822 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
LTN1O94822 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
LTN1O94822 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.34■■■□□ 2.61
LTN1O94822 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
LTN1O94822 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.33■■■□□ 2.61
LTN1O94822 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
LTN1O94822 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.33■■■□□ 2.61
LTN1O94822 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.33■■■□□ 2.61
LTN1O94822 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
LTN1O94822 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LTN1O94822 AC131274.2-201ENST00000580697 1507 ntBASIC31.32■■■□□ 2.61
LTN1O94822 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.61
LTN1O94822 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
LTN1O94822 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms