Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MIR6089-201ENST00000616698 64 ntBASIC21.15■□□□□ 0.98
ZIC3O60481 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ZIC3O60481 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZIC3O60481 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.15■□□□□ 0.98
ZIC3O60481 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ZIC3O60481 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZIC3O60481 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZIC3O60481 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.14■□□□□ 0.97
ZIC3O60481 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.14■□□□□ 0.97
ZIC3O60481 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
ZIC3O60481 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.14■□□□□ 0.97
ZIC3O60481 AC020928.2-201ENST00000588717 2197 ntBASIC21.14■□□□□ 0.97
ZIC3O60481 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZIC3O60481 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.14■□□□□ 0.97
ZIC3O60481 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZIC3O60481 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.14■□□□□ 0.97
ZIC3O60481 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZIC3O60481 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.13■□□□□ 0.97
ZIC3O60481 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZIC3O60481 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ZIC3O60481 BX664725.1-201ENST00000438252 379 ntBASIC21.13■□□□□ 0.97
ZIC3O60481 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.13■□□□□ 0.97
ZIC3O60481 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZIC3O60481 AF131216.4-201ENST00000638924 1588 ntBASIC21.13■□□□□ 0.97
ZIC3O60481 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ZIC3O60481 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ZIC3O60481 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZIC3O60481 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZIC3O60481 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZIC3O60481 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZIC3O60481 AC021242.3-201ENST00000607598 1377 ntBASIC21.11■□□□□ 0.97
ZIC3O60481 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZIC3O60481 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZIC3O60481 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZIC3O60481 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZIC3O60481 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZIC3O60481 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ZIC3O60481 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ZIC3O60481 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZIC3O60481 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZIC3O60481 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ZIC3O60481 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZIC3O60481 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZIC3O60481 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZIC3O60481 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.09■□□□□ 0.97
ZIC3O60481 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.09■□□□□ 0.97
ZIC3O60481 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.09■□□□□ 0.97
ZIC3O60481 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZIC3O60481 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.09■□□□□ 0.97
ZIC3O60481 KRT125P-201ENST00000546827 989 ntBASIC21.09■□□□□ 0.97
ZIC3O60481 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZIC3O60481 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
ZIC3O60481 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZIC3O60481 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ZIC3O60481 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZIC3O60481 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZIC3O60481 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZIC3O60481 GUSBP5-201ENST00000418136 578 ntBASIC21.08■□□□□ 0.97
ZIC3O60481 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZIC3O60481 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.08■□□□□ 0.97
ZIC3O60481 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZIC3O60481 MIR4787-201ENST00000607364 84 ntBASIC21.08■□□□□ 0.97
ZIC3O60481 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.08■□□□□ 0.96
ZIC3O60481 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZIC3O60481 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZIC3O60481 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZIC3O60481 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZIC3O60481 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.07■□□□□ 0.96
ZIC3O60481 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.07■□□□□ 0.96
ZIC3O60481 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZIC3O60481 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZIC3O60481 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.06■□□□□ 0.96
ZIC3O60481 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.06■□□□□ 0.96
ZIC3O60481 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.06■□□□□ 0.96
ZIC3O60481 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZIC3O60481 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZIC3O60481 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZIC3O60481 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZIC3O60481 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.05■□□□□ 0.96
ZIC3O60481 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.05■□□□□ 0.96
ZIC3O60481 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ZIC3O60481 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZIC3O60481 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZIC3O60481 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZIC3O60481 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.04■□□□□ 0.96
ZIC3O60481 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.04■□□□□ 0.96
ZIC3O60481 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZIC3O60481 AC142381.3-201ENST00000568208 1670 ntBASIC21.04■□□□□ 0.96
ZIC3O60481 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZIC3O60481 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZIC3O60481 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZIC3O60481 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.04■□□□□ 0.96
ZIC3O60481 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.04■□□□□ 0.96
ZIC3O60481 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.04■□□□□ 0.96
ZIC3O60481 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZIC3O60481 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZIC3O60481 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.03■□□□□ 0.96
ZIC3O60481 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.03■□□□□ 0.96
ZIC3O60481 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.03■□□□□ 0.96
ZIC3O60481 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 806.9 ms