Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.11■■□□□ 1.61
PCDHA13Q9Y5I0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PCDHA13Q9Y5I0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA13Q9Y5I0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHA13Q9Y5I0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHA13Q9Y5I0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA13Q9Y5I0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
PCDHA13Q9Y5I0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA13Q9Y5I0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
PCDHA13Q9Y5I0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
PCDHA13Q9Y5I0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHA13Q9Y5I0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHA13Q9Y5I0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PCDHA13Q9Y5I0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA13Q9Y5I0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHA13Q9Y5I0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA13Q9Y5I0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHA13Q9Y5I0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PCDHA13Q9Y5I0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHA13Q9Y5I0 ABCB10P4-201ENST00000566803 2184 ntBASIC25.07■■□□□ 1.6
PCDHA13Q9Y5I0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
PCDHA13Q9Y5I0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHA13Q9Y5I0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA13Q9Y5I0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.06■■□□□ 1.6
PCDHA13Q9Y5I0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHA13Q9Y5I0 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHA13Q9Y5I0 AC012676.1-201ENST00000574705 1949 ntBASIC25.06■■□□□ 1.6
PCDHA13Q9Y5I0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHA13Q9Y5I0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA13Q9Y5I0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA13Q9Y5I0 AC068473.5-201ENST00000616428 2072 ntBASIC25.05■■□□□ 1.6
PCDHA13Q9Y5I0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PCDHA13Q9Y5I0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHA13Q9Y5I0 RP9P-202ENST00000450133 1212 ntBASIC25.05■■□□□ 1.6
PCDHA13Q9Y5I0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHA13Q9Y5I0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PCDHA13Q9Y5I0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDHA13Q9Y5I0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.04■■□□□ 1.6
PCDHA13Q9Y5I0 HLA-L-211ENST00000482052 1765 ntBASIC25.04■■□□□ 1.6
PCDHA13Q9Y5I0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.04■■□□□ 1.6
PCDHA13Q9Y5I0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA13Q9Y5I0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
PCDHA13Q9Y5I0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHA13Q9Y5I0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA13Q9Y5I0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PCDHA13Q9Y5I0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHA13Q9Y5I0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHA13Q9Y5I0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDHA13Q9Y5I0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA13Q9Y5I0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHA13Q9Y5I0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 AC093536.1-201ENST00000569153 554 ntBASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHA13Q9Y5I0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA13Q9Y5I0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
PCDHA13Q9Y5I0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDHA13Q9Y5I0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA13Q9Y5I0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA13Q9Y5I0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA13Q9Y5I0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.01■■□□□ 1.59
PCDHA13Q9Y5I0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHA13Q9Y5I0 DUSP8P5-201ENST00000422884 1815 ntBASIC25■■□□□ 1.59
PCDHA13Q9Y5I0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA13Q9Y5I0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDHA13Q9Y5I0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25■■□□□ 1.59
PCDHA13Q9Y5I0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25■■□□□ 1.59
PCDHA13Q9Y5I0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PCDHA13Q9Y5I0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA13Q9Y5I0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA13Q9Y5I0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA13Q9Y5I0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA13Q9Y5I0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHA13Q9Y5I0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA13Q9Y5I0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
PCDHA13Q9Y5I0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA13Q9Y5I0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
PCDHA13Q9Y5I0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms