Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SLC44A1Q8WWI5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.57■■□□□ 1.36
SLC44A1Q8WWI5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SLC44A1Q8WWI5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 AC068473.5-201ENST00000616428 2072 ntBASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC44A1Q8WWI5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC44A1Q8WWI5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.54■■□□□ 1.36
SLC44A1Q8WWI5 ABCB10P4-201ENST00000566803 2184 ntBASIC23.54■■□□□ 1.36
SLC44A1Q8WWI5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SLC44A1Q8WWI5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC44A1Q8WWI5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 HLA-L-211ENST00000482052 1765 ntBASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 DUSP8P5-201ENST00000422884 1815 ntBASIC23.52■■□□□ 1.36
SLC44A1Q8WWI5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC44A1Q8WWI5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.51■■□□□ 1.35
SLC44A1Q8WWI5 RP9P-202ENST00000450133 1212 ntBASIC23.51■■□□□ 1.35
SLC44A1Q8WWI5 ECEL1P2-201ENST00000461596 1295 ntBASIC23.51■■□□□ 1.35
SLC44A1Q8WWI5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC44A1Q8WWI5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC44A1Q8WWI5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC44A1Q8WWI5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 AC093536.1-201ENST00000569153 554 ntBASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC44A1Q8WWI5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.46■■□□□ 1.35
SLC44A1Q8WWI5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
SLC44A1Q8WWI5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SLC44A1Q8WWI5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC44A1Q8WWI5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.45■■□□□ 1.34
SLC44A1Q8WWI5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.45■■□□□ 1.34
SLC44A1Q8WWI5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
SLC44A1Q8WWI5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
SLC44A1Q8WWI5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms