Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RTTNQ86VV8 RPS2P7-201ENST00000447334 885 ntBASIC20.59■□□□□ 0.89
RTTNQ86VV8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTTNQ86VV8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTTNQ86VV8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTTNQ86VV8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTTNQ86VV8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTTNQ86VV8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTTNQ86VV8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.59■□□□□ 0.89
RTTNQ86VV8 AC138932.3-201ENST00000567634 1902 ntBASIC20.59■□□□□ 0.89
RTTNQ86VV8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTTNQ86VV8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.58■□□□□ 0.89
RTTNQ86VV8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTTNQ86VV8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
RTTNQ86VV8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.58■□□□□ 0.89
RTTNQ86VV8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTTNQ86VV8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.58■□□□□ 0.89
RTTNQ86VV8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTTNQ86VV8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.58■□□□□ 0.88
RTTNQ86VV8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTTNQ86VV8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
RTTNQ86VV8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTTNQ86VV8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RTTNQ86VV8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RTTNQ86VV8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTTNQ86VV8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.57■□□□□ 0.88
RTTNQ86VV8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RTTNQ86VV8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RTTNQ86VV8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTTNQ86VV8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.57■□□□□ 0.88
RTTNQ86VV8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTTNQ86VV8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.57■□□□□ 0.88
RTTNQ86VV8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTTNQ86VV8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTTNQ86VV8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTTNQ86VV8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTTNQ86VV8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTTNQ86VV8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTTNQ86VV8 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.56■□□□□ 0.88
RTTNQ86VV8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.56■□□□□ 0.88
RTTNQ86VV8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RTTNQ86VV8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.56■□□□□ 0.88
RTTNQ86VV8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTTNQ86VV8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTTNQ86VV8 AC010980.1-201ENST00000587192 1142 ntBASIC20.55■□□□□ 0.88
RTTNQ86VV8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.55■□□□□ 0.88
RTTNQ86VV8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.55■□□□□ 0.88
RTTNQ86VV8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.55■□□□□ 0.88
RTTNQ86VV8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTTNQ86VV8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RTTNQ86VV8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTTNQ86VV8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RTTNQ86VV8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTTNQ86VV8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.54■□□□□ 0.88
RTTNQ86VV8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.54■□□□□ 0.88
RTTNQ86VV8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.54■□□□□ 0.88
RTTNQ86VV8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTTNQ86VV8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTTNQ86VV8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTTNQ86VV8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTTNQ86VV8 AC139795.1-202ENST00000500444 432 ntBASIC20.54■□□□□ 0.88
RTTNQ86VV8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.54■□□□□ 0.88
RTTNQ86VV8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTTNQ86VV8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTTNQ86VV8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.53■□□□□ 0.88
RTTNQ86VV8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTTNQ86VV8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RTTNQ86VV8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
RTTNQ86VV8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
RTTNQ86VV8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RTTNQ86VV8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.52■□□□□ 0.88
RTTNQ86VV8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RTTNQ86VV8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTTNQ86VV8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTTNQ86VV8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTTNQ86VV8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTTNQ86VV8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.52■□□□□ 0.88
RTTNQ86VV8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.52■□□□□ 0.88
RTTNQ86VV8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.52■□□□□ 0.88
RTTNQ86VV8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTTNQ86VV8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RTTNQ86VV8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTTNQ86VV8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.51■□□□□ 0.87
RTTNQ86VV8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.51■□□□□ 0.87
RTTNQ86VV8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RTTNQ86VV8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.51■□□□□ 0.87
RTTNQ86VV8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTTNQ86VV8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms