Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
FREM1Q5H8C1 AL592295.1-201ENST00000400984 884 ntBASIC20.78■□□□□ 0.92
FREM1Q5H8C1 AC120024.1-201ENST00000562672 995 ntBASIC20.78■□□□□ 0.92
FREM1Q5H8C1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FREM1Q5H8C1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FREM1Q5H8C1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FREM1Q5H8C1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FREM1Q5H8C1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FREM1Q5H8C1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FREM1Q5H8C1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.77■□□□□ 0.92
FREM1Q5H8C1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.77■□□□□ 0.92
FREM1Q5H8C1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FREM1Q5H8C1 AC020928.2-201ENST00000588717 2197 ntBASIC20.76■□□□□ 0.91
FREM1Q5H8C1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.75■□□□□ 0.91
FREM1Q5H8C1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.75■□□□□ 0.91
FREM1Q5H8C1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
FREM1Q5H8C1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FREM1Q5H8C1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FREM1Q5H8C1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FREM1Q5H8C1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FREM1Q5H8C1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FREM1Q5H8C1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.74■□□□□ 0.91
FREM1Q5H8C1 BX664725.1-201ENST00000438252 379 ntBASIC20.74■□□□□ 0.91
FREM1Q5H8C1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
FREM1Q5H8C1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.74■□□□□ 0.91
FREM1Q5H8C1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.74■□□□□ 0.91
FREM1Q5H8C1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FREM1Q5H8C1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
FREM1Q5H8C1 AC011551.1-201ENST00000614101 683 ntBASIC20.73■□□□□ 0.91
FREM1Q5H8C1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FREM1Q5H8C1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FREM1Q5H8C1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.73■□□□□ 0.91
FREM1Q5H8C1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.73■□□□□ 0.91
FREM1Q5H8C1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FREM1Q5H8C1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 AC239859.2-201ENST00000444165 318 ntBASIC20.72■□□□□ 0.91
FREM1Q5H8C1 THA1P-201ENST00000590384 1145 ntBASIC20.72■□□□□ 0.91
FREM1Q5H8C1 AC137630.3-201ENST00000607245 391 ntBASIC20.72■□□□□ 0.91
FREM1Q5H8C1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 AC022211.4-201ENST00000625094 2161 ntBASIC20.72■□□□□ 0.91
FREM1Q5H8C1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FREM1Q5H8C1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FREM1Q5H8C1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.71■□□□□ 0.91
FREM1Q5H8C1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.71■□□□□ 0.91
FREM1Q5H8C1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FREM1Q5H8C1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FREM1Q5H8C1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.7■□□□□ 0.9
FREM1Q5H8C1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FREM1Q5H8C1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
FREM1Q5H8C1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.7■□□□□ 0.9
FREM1Q5H8C1 AF131216.4-201ENST00000638924 1588 ntBASIC20.7■□□□□ 0.9
FREM1Q5H8C1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FREM1Q5H8C1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.7■□□□□ 0.9
FREM1Q5H8C1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.7■□□□□ 0.9
FREM1Q5H8C1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.69■□□□□ 0.9
FREM1Q5H8C1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.69■□□□□ 0.9
FREM1Q5H8C1 MIR4787-201ENST00000607364 84 ntBASIC20.69■□□□□ 0.9
FREM1Q5H8C1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FREM1Q5H8C1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM1Q5H8C1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM1Q5H8C1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FREM1Q5H8C1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM1Q5H8C1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.68■□□□□ 0.9
FREM1Q5H8C1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FREM1Q5H8C1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.68■□□□□ 0.9
FREM1Q5H8C1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.68■□□□□ 0.9
FREM1Q5H8C1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM1Q5H8C1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM1Q5H8C1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM1Q5H8C1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.68■□□□□ 0.9
FREM1Q5H8C1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM1Q5H8C1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FREM1Q5H8C1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FREM1Q5H8C1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
FREM1Q5H8C1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FREM1Q5H8C1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
FREM1Q5H8C1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.66■□□□□ 0.9
FREM1Q5H8C1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.66■□□□□ 0.9
FREM1Q5H8C1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.66■□□□□ 0.9
FREM1Q5H8C1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms