Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.02■■□□□ 1.76
CLCN3P51790 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLCN3P51790 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLCN3P51790 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLCN3P51790 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.02■■□□□ 1.76
CLCN3P51790 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CLCN3P51790 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLCN3P51790 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CLCN3P51790 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CLCN3P51790 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.01■■□□□ 1.75
CLCN3P51790 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.01■■□□□ 1.75
CLCN3P51790 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.01■■□□□ 1.75
CLCN3P51790 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26■■□□□ 1.75
CLCN3P51790 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26■■□□□ 1.75
CLCN3P51790 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26■■□□□ 1.75
CLCN3P51790 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26■■□□□ 1.75
CLCN3P51790 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26■■□□□ 1.75
CLCN3P51790 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26■■□□□ 1.75
CLCN3P51790 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
CLCN3P51790 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26■■□□□ 1.75
CLCN3P51790 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26■■□□□ 1.75
CLCN3P51790 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLCN3P51790 KRT16P3-201ENST00000439127 1283 ntBASIC25.99■■□□□ 1.75
CLCN3P51790 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLCN3P51790 AC092028.1-203ENST00000608262 953 ntBASIC25.99■■□□□ 1.75
CLCN3P51790 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLCN3P51790 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CLCN3P51790 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.98■■□□□ 1.75
CLCN3P51790 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.98■■□□□ 1.75
CLCN3P51790 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.98■■□□□ 1.75
CLCN3P51790 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
CLCN3P51790 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.98■■□□□ 1.75
CLCN3P51790 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLCN3P51790 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLCN3P51790 AC091060.1-201ENST00000623524 1766 ntBASIC25.97■■□□□ 1.75
CLCN3P51790 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CLCN3P51790 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CLCN3P51790 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.97■■□□□ 1.75
CLCN3P51790 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.97■■□□□ 1.75
CLCN3P51790 AF131216.4-201ENST00000638924 1588 ntBASIC25.97■■□□□ 1.75
CLCN3P51790 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.97■■□□□ 1.75
CLCN3P51790 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLCN3P51790 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLCN3P51790 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.96■■□□□ 1.75
CLCN3P51790 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLCN3P51790 DUSP8P4-201ENST00000399538 1761 ntBASIC25.96■■□□□ 1.75
CLCN3P51790 AC090877.2-201ENST00000558441 1738 ntBASIC25.96■■□□□ 1.75
CLCN3P51790 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.96■■□□□ 1.75
CLCN3P51790 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.96■■□□□ 1.75
CLCN3P51790 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CLCN3P51790 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.95■■□□□ 1.74
CLCN3P51790 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
CLCN3P51790 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.95■■□□□ 1.74
CLCN3P51790 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN3P51790 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CLCN3P51790 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.94■■□□□ 1.74
CLCN3P51790 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLCN3P51790 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.94■■□□□ 1.74
CLCN3P51790 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLCN3P51790 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.93■■□□□ 1.74
CLCN3P51790 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.93■■□□□ 1.74
CLCN3P51790 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLCN3P51790 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.92■■□□□ 1.74
CLCN3P51790 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.92■■□□□ 1.74
CLCN3P51790 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.91■■□□□ 1.74
CLCN3P51790 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.91■■□□□ 1.74
CLCN3P51790 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLCN3P51790 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
CLCN3P51790 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CLCN3P51790 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CLCN3P51790 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.9■■□□□ 1.74
CLCN3P51790 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.9■■□□□ 1.74
CLCN3P51790 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CLCN3P51790 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
CLCN3P51790 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CLCN3P51790 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CLCN3P51790 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CLCN3P51790 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.74
CLCN3P51790 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.89■■□□□ 1.74
CLCN3P51790 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
CLCN3P51790 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CLCN3P51790 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.89■■□□□ 1.73
CLCN3P51790 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
CLCN3P51790 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLCN3P51790 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLCN3P51790 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
CLCN3P51790 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.88■■□□□ 1.73
CLCN3P51790 AC145676.1-201ENST00000514988 2004 ntBASIC25.88■■□□□ 1.73
CLCN3P51790 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CLCN3P51790 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CLCN3P51790 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CLCN3P51790 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CLCN3P51790 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLCN3P51790 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.86■■□□□ 1.73
CLCN3P51790 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLCN3P51790 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CLCN3P51790 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.85■■□□□ 1.73
CLCN3P51790 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
CLCN3P51790 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLCN3P51790 SLC6A10P-202ENST00000431994 2058 ntBASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms