Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.5■■□□□ 1.83
DDX39AO00148 GUSBP5-201ENST00000418136 578 ntBASIC26.5■■□□□ 1.83
DDX39AO00148 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.5■■□□□ 1.83
DDX39AO00148 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX39AO00148 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.49■■□□□ 1.83
DDX39AO00148 BX664725.1-201ENST00000438252 379 ntBASIC26.49■■□□□ 1.83
DDX39AO00148 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DDX39AO00148 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX39AO00148 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.49■■□□□ 1.83
DDX39AO00148 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX39AO00148 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.48■■□□□ 1.83
DDX39AO00148 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
DDX39AO00148 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.48■■□□□ 1.83
DDX39AO00148 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX39AO00148 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.47■■□□□ 1.83
DDX39AO00148 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX39AO00148 AC011551.1-201ENST00000614101 683 ntBASIC26.47■■□□□ 1.83
DDX39AO00148 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
DDX39AO00148 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
DDX39AO00148 Z92544.1-202ENST00000571933 1220 ntBASIC26.46■■□□□ 1.83
DDX39AO00148 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX39AO00148 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
DDX39AO00148 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX39AO00148 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.45■■□□□ 1.83
DDX39AO00148 SLC6A10P-202ENST00000431994 2058 ntBASIC26.45■■□□□ 1.83
DDX39AO00148 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX39AO00148 KRT125P-201ENST00000546827 989 ntBASIC26.45■■□□□ 1.82
DDX39AO00148 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.45■■□□□ 1.82
DDX39AO00148 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX39AO00148 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX39AO00148 MIR4787-201ENST00000607364 84 ntBASIC26.44■■□□□ 1.82
DDX39AO00148 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.44■■□□□ 1.82
DDX39AO00148 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.44■■□□□ 1.82
DDX39AO00148 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX39AO00148 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX39AO00148 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX39AO00148 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
DDX39AO00148 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
DDX39AO00148 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.43■■□□□ 1.82
DDX39AO00148 AC137630.3-201ENST00000607245 391 ntBASIC26.43■■□□□ 1.82
DDX39AO00148 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX39AO00148 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.42■■□□□ 1.82
DDX39AO00148 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX39AO00148 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.42■■□□□ 1.82
DDX39AO00148 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.42■■□□□ 1.82
DDX39AO00148 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.42■■□□□ 1.82
DDX39AO00148 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.42■■□□□ 1.82
DDX39AO00148 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX39AO00148 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.42■■□□□ 1.82
DDX39AO00148 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.42■■□□□ 1.82
DDX39AO00148 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX39AO00148 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX39AO00148 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.41■■□□□ 1.82
DDX39AO00148 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.41■■□□□ 1.82
DDX39AO00148 AC090877.2-201ENST00000558441 1738 ntBASIC26.41■■□□□ 1.82
DDX39AO00148 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.41■■□□□ 1.82
DDX39AO00148 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX39AO00148 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX39AO00148 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
DDX39AO00148 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX39AO00148 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
DDX39AO00148 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX39AO00148 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
DDX39AO00148 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX39AO00148 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
DDX39AO00148 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.39■■□□□ 1.82
DDX39AO00148 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX39AO00148 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.39■■□□□ 1.82
DDX39AO00148 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
DDX39AO00148 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
DDX39AO00148 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
DDX39AO00148 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
DDX39AO00148 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DDX39AO00148 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
DDX39AO00148 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.38■■□□□ 1.81
DDX39AO00148 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX39AO00148 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
DDX39AO00148 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.38■■□□□ 1.81
DDX39AO00148 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.38■■□□□ 1.81
DDX39AO00148 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DDX39AO00148 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DDX39AO00148 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.37■■□□□ 1.81
DDX39AO00148 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DDX39AO00148 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
DDX39AO00148 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.37■■□□□ 1.81
DDX39AO00148 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
DDX39AO00148 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DDX39AO00148 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX39AO00148 AC021242.3-201ENST00000607598 1377 ntBASIC26.36■■□□□ 1.81
DDX39AO00148 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.36■■□□□ 1.81
DDX39AO00148 TSPY9P-201ENST00000440215 945 ntBASIC26.36■■□□□ 1.81
DDX39AO00148 TSPY11P-201ENST00000442607 1045 ntBASIC26.36■■□□□ 1.81
DDX39AO00148 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX39AO00148 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.36■■□□□ 1.81
DDX39AO00148 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
DDX39AO00148 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
DDX39AO00148 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.34■■□□□ 1.81
DDX39AO00148 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX39AO00148 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.34■■□□□ 1.81
DDX39AO00148 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms