Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
TRBV23-1A0A0A0MS06 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.66■□□□□ 0.74
TRBV23-1A0A0A0MS06 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TRBV23-1A0A0A0MS06 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRBV23-1A0A0A0MS06 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRBV23-1A0A0A0MS06 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRBV23-1A0A0A0MS06 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 AC019171.1-201ENST00000601251 1056 ntBASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRBV23-1A0A0A0MS06 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV23-1A0A0A0MS06 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV23-1A0A0A0MS06 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV23-1A0A0A0MS06 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV23-1A0A0A0MS06 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV23-1A0A0A0MS06 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 LONRF2P2-201ENST00000439212 571 ntBASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV23-1A0A0A0MS06 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV23-1A0A0A0MS06 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRBV23-1A0A0A0MS06 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
TRBV23-1A0A0A0MS06 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV23-1A0A0A0MS06 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRBV23-1A0A0A0MS06 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV23-1A0A0A0MS06 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV23-1A0A0A0MS06 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV23-1A0A0A0MS06 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV23-1A0A0A0MS06 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 LINC00543-201ENST00000567234 1845 ntBASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV23-1A0A0A0MS06 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.58■□□□□ 0.72
TRBV23-1A0A0A0MS06 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV23-1A0A0A0MS06 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV23-1A0A0A0MS06 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV23-1A0A0A0MS06 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms