Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV6-7A0A0A0MS04 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV6-7A0A0A0MS04 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV6-7A0A0A0MS04 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.63■□□□□ 0.73
TRBV6-7A0A0A0MS04 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRBV6-7A0A0A0MS04 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV6-7A0A0A0MS04 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRBV6-7A0A0A0MS04 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV6-7A0A0A0MS04 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV6-7A0A0A0MS04 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV6-7A0A0A0MS04 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 AC092296.2-201ENST00000589470 999 ntBASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-7A0A0A0MS04 AC141586.4-201ENST00000624558 1573 ntBASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-7A0A0A0MS04 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV6-7A0A0A0MS04 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV6-7A0A0A0MS04 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV6-7A0A0A0MS04 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV6-7A0A0A0MS04 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
TRBV6-7A0A0A0MS04 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV6-7A0A0A0MS04 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV6-7A0A0A0MS04 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBV6-7A0A0A0MS04 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.58■□□□□ 0.73
TRBV6-7A0A0A0MS04 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV6-7A0A0A0MS04 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV6-7A0A0A0MS04 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.58■□□□□ 0.72
TRBV6-7A0A0A0MS04 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV6-7A0A0A0MS04 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV6-7A0A0A0MS04 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.58■□□□□ 0.72
TRBV6-7A0A0A0MS04 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV6-7A0A0A0MS04 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV6-7A0A0A0MS04 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV6-7A0A0A0MS04 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV6-7A0A0A0MS04 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV6-7A0A0A0MS04 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV6-7A0A0A0MS04 ECEL1P2-201ENST00000461596 1295 ntBASIC19.57■□□□□ 0.72
TRBV6-7A0A0A0MS04 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.57■□□□□ 0.72
TRBV6-7A0A0A0MS04 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRBV6-7A0A0A0MS04 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV6-7A0A0A0MS04 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-7A0A0A0MS04 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-7A0A0A0MS04 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-7A0A0A0MS04 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-7A0A0A0MS04 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-7A0A0A0MS04 MIR7108-201ENST00000614319 87 ntBASIC19.56■□□□□ 0.72
TRBV6-7A0A0A0MS04 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-7A0A0A0MS04 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-7A0A0A0MS04 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-7A0A0A0MS04 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms