Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ALX4Q9H161 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.87■□□□□ 0.77
ALX4Q9H161 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.87■□□□□ 0.77
ALX4Q9H161 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX4Q9H161 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX4Q9H161 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.87■□□□□ 0.77
ALX4Q9H161 DUX4L13-201ENST00000554103 1267 ntBASIC19.87■□□□□ 0.77
ALX4Q9H161 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.87■□□□□ 0.77
ALX4Q9H161 DUX4L15-201ENST00000611059 1267 ntBASIC19.87■□□□□ 0.77
ALX4Q9H161 DUX4L23-201ENST00000615195 1269 ntBASIC19.87■□□□□ 0.77
ALX4Q9H161 DUX4L24-201ENST00000617576 1269 ntBASIC19.87■□□□□ 0.77
ALX4Q9H161 DUX4L22-201ENST00000618238 1269 ntBASIC19.87■□□□□ 0.77
ALX4Q9H161 DUX4L20-201ENST00000619712 1269 ntBASIC19.87■□□□□ 0.77
ALX4Q9H161 DUX4L21-201ENST00000622058 1269 ntBASIC19.87■□□□□ 0.77
ALX4Q9H161 DUX4L10-201ENST00000622460 1267 ntBASIC19.87■□□□□ 0.77
ALX4Q9H161 DUX4L25-201ENST00000624915 1269 ntBASIC19.87■□□□□ 0.77
ALX4Q9H161 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ALX4Q9H161 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.87■□□□□ 0.77
ALX4Q9H161 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ALX4Q9H161 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALX4Q9H161 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ALX4Q9H161 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ALX4Q9H161 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.86■□□□□ 0.77
ALX4Q9H161 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALX4Q9H161 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.86■□□□□ 0.77
ALX4Q9H161 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ALX4Q9H161 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ALX4Q9H161 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ALX4Q9H161 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.86■□□□□ 0.77
ALX4Q9H161 AC004812.2-201ENST00000611079 2094 ntBASIC19.85■□□□□ 0.77
ALX4Q9H161 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ALX4Q9H161 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ALX4Q9H161 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.85■□□□□ 0.77
ALX4Q9H161 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALX4Q9H161 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.85■□□□□ 0.77
ALX4Q9H161 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ALX4Q9H161 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX4Q9H161 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ALX4Q9H161 AL117328.2-201ENST00000624617 1940 ntBASIC19.84■□□□□ 0.77
ALX4Q9H161 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.84■□□□□ 0.77
ALX4Q9H161 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALX4Q9H161 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.84■□□□□ 0.77
ALX4Q9H161 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.84■□□□□ 0.77
ALX4Q9H161 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALX4Q9H161 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ALX4Q9H161 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.84■□□□□ 0.77
ALX4Q9H161 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALX4Q9H161 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALX4Q9H161 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALX4Q9H161 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ALX4Q9H161 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ALX4Q9H161 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ALX4Q9H161 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.83■□□□□ 0.77
ALX4Q9H161 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ALX4Q9H161 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ALX4Q9H161 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ALX4Q9H161 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALX4Q9H161 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALX4Q9H161 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALX4Q9H161 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.82■□□□□ 0.76
ALX4Q9H161 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ALX4Q9H161 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ALX4Q9H161 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
ALX4Q9H161 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ALX4Q9H161 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ALX4Q9H161 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALX4Q9H161 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ALX4Q9H161 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALX4Q9H161 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.81■□□□□ 0.76
ALX4Q9H161 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALX4Q9H161 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALX4Q9H161 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALX4Q9H161 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALX4Q9H161 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALX4Q9H161 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.81■□□□□ 0.76
ALX4Q9H161 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ALX4Q9H161 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ALX4Q9H161 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALX4Q9H161 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALX4Q9H161 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.8■□□□□ 0.76
ALX4Q9H161 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ALX4Q9H161 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.8■□□□□ 0.76
ALX4Q9H161 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALX4Q9H161 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALX4Q9H161 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.8■□□□□ 0.76
ALX4Q9H161 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ALX4Q9H161 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ALX4Q9H161 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.79■□□□□ 0.76
ALX4Q9H161 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ALX4Q9H161 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ALX4Q9H161 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALX4Q9H161 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALX4Q9H161 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.79■□□□□ 0.76
ALX4Q9H161 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALX4Q9H161 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ALX4Q9H161 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ALX4Q9H161 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ALX4Q9H161 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALX4Q9H161 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ALX4Q9H161 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms