Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC190Q86UF4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC190Q86UF4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 AC110285.7-201ENST00000624417 1536 ntBASIC20.6■□□□□ 0.89
CCDC190Q86UF4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC190Q86UF4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC190Q86UF4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC190Q86UF4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC190Q86UF4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC190Q86UF4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC190Q86UF4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC190Q86UF4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC190Q86UF4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC190Q86UF4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC190Q86UF4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC190Q86UF4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC190Q86UF4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC190Q86UF4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC190Q86UF4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC190Q86UF4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC190Q86UF4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC190Q86UF4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC190Q86UF4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC190Q86UF4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC190Q86UF4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC190Q86UF4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC190Q86UF4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC190Q86UF4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC190Q86UF4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC190Q86UF4 AC137767.1-201ENST00000602918 1920 ntBASIC20.56■□□□□ 0.88
CCDC190Q86UF4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC190Q86UF4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC190Q86UF4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC190Q86UF4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC190Q86UF4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC190Q86UF4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC190Q86UF4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC190Q86UF4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 C1orf229-201ENST00000623686 2258 ntBASIC20.53■□□□□ 0.88
CCDC190Q86UF4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.53■□□□□ 0.88
CCDC190Q86UF4 LINC00526-201ENST00000581067 1875 ntBASIC20.52■□□□□ 0.88
CCDC190Q86UF4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC190Q86UF4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC190Q86UF4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.52■□□□□ 0.88
CCDC190Q86UF4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC190Q86UF4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC190Q86UF4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC190Q86UF4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
CCDC190Q86UF4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms