Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.2■□□□□ 0.66
TREML4Q6UXN2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TREML4Q6UXN2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TREML4Q6UXN2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TREML4Q6UXN2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TREML4Q6UXN2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TREML4Q6UXN2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TREML4Q6UXN2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TREML4Q6UXN2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TREML4Q6UXN2 AC022211.4-201ENST00000625094 2161 ntBASIC19.19■□□□□ 0.66
TREML4Q6UXN2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TREML4Q6UXN2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TREML4Q6UXN2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.19■□□□□ 0.66
TREML4Q6UXN2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TREML4Q6UXN2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TREML4Q6UXN2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 AC018755.3-202ENST00000596210 929 ntBASIC19.18■□□□□ 0.66
TREML4Q6UXN2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 AL031848.2-201ENST00000607670 837 ntBASIC19.18■□□□□ 0.66
TREML4Q6UXN2 PVT1_1.1-201ENST00000615125 194 ntBASIC19.18■□□□□ 0.66
TREML4Q6UXN2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.18■□□□□ 0.66
TREML4Q6UXN2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 RAP2CP1-202ENST00000605179 643 ntBASIC19.17■□□□□ 0.66
TREML4Q6UXN2 AL359258.2-201ENST00000564063 1566 ntBASIC19.17■□□□□ 0.66
TREML4Q6UXN2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 AC138932.3-201ENST00000567634 1902 ntBASIC19.17■□□□□ 0.66
TREML4Q6UXN2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TREML4Q6UXN2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TREML4Q6UXN2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 AL139125.2-201ENST00000623134 1869 ntBASIC19.15■□□□□ 0.66
TREML4Q6UXN2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TREML4Q6UXN2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TREML4Q6UXN2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TREML4Q6UXN2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TREML4Q6UXN2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TREML4Q6UXN2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.14■□□□□ 0.65
TREML4Q6UXN2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TREML4Q6UXN2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TREML4Q6UXN2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TREML4Q6UXN2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TREML4Q6UXN2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.14■□□□□ 0.65
TREML4Q6UXN2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TREML4Q6UXN2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TREML4Q6UXN2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.13■□□□□ 0.65
TREML4Q6UXN2 AC103724.3-201ENST00000564481 992 ntBASIC19.13■□□□□ 0.65
TREML4Q6UXN2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TREML4Q6UXN2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TREML4Q6UXN2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.13■□□□□ 0.65
TREML4Q6UXN2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TREML4Q6UXN2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.12■□□□□ 0.65
TREML4Q6UXN2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TREML4Q6UXN2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.11■□□□□ 0.65
TREML4Q6UXN2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TREML4Q6UXN2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.11■□□□□ 0.65
TREML4Q6UXN2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TREML4Q6UXN2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms