Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM4SF20Q53R12 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF20Q53R12 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF20Q53R12 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.21■□□□□ 0.51
TM4SF20Q53R12 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.21■□□□□ 0.51
TM4SF20Q53R12 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.21■□□□□ 0.51
TM4SF20Q53R12 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM4SF20Q53R12 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF20Q53R12 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF20Q53R12 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF20Q53R12 KRT18P10-201ENST00000388836 1287 ntBASIC18.2■□□□□ 0.5
TM4SF20Q53R12 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF20Q53R12 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF20Q53R12 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF20Q53R12 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM4SF20Q53R12 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.2■□□□□ 0.5
TM4SF20Q53R12 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.2■□□□□ 0.5
TM4SF20Q53R12 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF20Q53R12 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF20Q53R12 AC004987.1-201ENST00000428627 508 ntBASIC18.19■□□□□ 0.5
TM4SF20Q53R12 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF20Q53R12 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TM4SF20Q53R12 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF20Q53R12 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF20Q53R12 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF20Q53R12 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM4SF20Q53R12 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF20Q53R12 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
TM4SF20Q53R12 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF20Q53R12 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF20Q53R12 ATP5G2P3-201ENST00000429083 425 ntBASIC18.18■□□□□ 0.5
TM4SF20Q53R12 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TM4SF20Q53R12 AC012354.3-201ENST00000623734 483 ntBASIC18.18■□□□□ 0.5
TM4SF20Q53R12 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TM4SF20Q53R12 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.18■□□□□ 0.5
TM4SF20Q53R12 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF20Q53R12 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM4SF20Q53R12 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 AC020928.2-201ENST00000588717 2197 ntBASIC18.17■□□□□ 0.5
TM4SF20Q53R12 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TM4SF20Q53R12 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.16■□□□□ 0.5
TM4SF20Q53R12 RPS2P7-201ENST00000447334 885 ntBASIC18.16■□□□□ 0.5
TM4SF20Q53R12 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.16■□□□□ 0.5
TM4SF20Q53R12 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF20Q53R12 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TM4SF20Q53R12 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 TSPY13P-201ENST00000338964 914 ntBASIC18.15■□□□□ 0.5
TM4SF20Q53R12 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 AL033527.3-201ENST00000566366 1196 ntBASIC18.15■□□□□ 0.5
TM4SF20Q53R12 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.15■□□□□ 0.5
TM4SF20Q53R12 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
TM4SF20Q53R12 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF20Q53R12 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF20Q53R12 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF20Q53R12 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF20Q53R12 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF20Q53R12 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TM4SF20Q53R12 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
TM4SF20Q53R12 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.14■□□□□ 0.49
TM4SF20Q53R12 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 AC087393.1-201ENST00000582896 145 ntBASIC18.13■□□□□ 0.49
TM4SF20Q53R12 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TM4SF20Q53R12 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF20Q53R12 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF20Q53R12 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF20Q53R12 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.12■□□□□ 0.49
TM4SF20Q53R12 AC139795.1-202ENST00000500444 432 ntBASIC18.12■□□□□ 0.49
TM4SF20Q53R12 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF20Q53R12 BHLHE23-202ENST00000612929 1109 ntBASIC18.12■□□□□ 0.49
TM4SF20Q53R12 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TM4SF20Q53R12 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms