Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC15.55■□□□□ 0.08
TRAV13-2A0A0B4J235 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-2A0A0B4J235 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-2A0A0B4J235 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV13-2A0A0B4J235 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-2A0A0B4J235 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-2A0A0B4J235 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV13-2A0A0B4J235 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV13-2A0A0B4J235 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-2A0A0B4J235 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-2A0A0B4J235 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-2A0A0B4J235 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV13-2A0A0B4J235 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-2A0A0B4J235 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-2A0A0B4J235 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-2A0A0B4J235 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV13-2A0A0B4J235 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 RPS2-209ENST00000529806 993 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV13-2A0A0B4J235 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV13-2A0A0B4J235 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV13-2A0A0B4J235 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV13-2A0A0B4J235 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV13-2A0A0B4J235 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV13-2A0A0B4J235 AL117328.2-201ENST00000624617 1940 ntBASIC15.52■□□□□ 0.07
TRAV13-2A0A0B4J235 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV13-2A0A0B4J235 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV13-2A0A0B4J235 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV13-2A0A0B4J235 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV13-2A0A0B4J235 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV13-2A0A0B4J235 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV13-2A0A0B4J235 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV13-2A0A0B4J235 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV13-2A0A0B4J235 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV13-2A0A0B4J235 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV13-2A0A0B4J235 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms