Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 EIF6-206ENST00000447927 932 ntTSL 1 (best)15.32■□□□□ 0.042e-26■□□□□ 9.1
CSTF2TQ9H0L4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.032e-26■□□□□ 9.1
CSTF2TQ9H0L4 RERE-216ENST00000505225 533 ntTSL 26.54□□□□□ -1.361e-6■□□□□ 9
CSTF2TQ9H0L4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.65■■□□□ 1.382e-8■□□□□ 9
CSTF2TQ9H0L4 HDAC10-219ENST00000497483 578 ntTSL 223.32■■□□□ 1.322e-6■□□□□ 9
CSTF2TQ9H0L4 TMED10-207ENST00000622441 612 nt19.69■□□□□ 0.742e-6■□□□□ 9
CSTF2TQ9H0L4 AKT1-206ENST00000553797 783 ntTSL 317.46■□□□□ 0.392e-8■□□□□ 9
CSTF2TQ9H0L4 SLC26A6-206ENST00000414944 724 ntTSL 316.48■□□□□ 0.232e-6■□□□□ 9
CSTF2TQ9H0L4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.222e-8■□□□□ 9
CSTF2TQ9H0L4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.86■□□□□ 0.132e-6■□□□□ 9
CSTF2TQ9H0L4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.052e-8■□□□□ 9
CSTF2TQ9H0L4 SLC26A6-212ENST00000444531 806 ntTSL 314.25□□□□□ -0.132e-6■□□□□ 9
CSTF2TQ9H0L4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.11□□□□□ -0.152e-8■□□□□ 9
CSTF2TQ9H0L4 SLC26A6-208ENST00000421649 910 ntTSL 314.03□□□□□ -0.162e-6■□□□□ 9
CSTF2TQ9H0L4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.172e-8■□□□□ 9
CSTF2TQ9H0L4 SLC26A6-219ENST00000485361 575 ntTSL 413.51□□□□□ -0.252e-6■□□□□ 9
CSTF2TQ9H0L4 SLC22A18-212ENST00000498209 782 ntTSL 313.34□□□□□ -0.276e-10■□□□□ 9
CSTF2TQ9H0L4 FUOM-206ENST00000478895 445 ntTSL 312.44□□□□□ -0.422e-8■□□□□ 9
CSTF2TQ9H0L4 TMED10-203ENST00000555085 553 ntTSL 212.24□□□□□ -0.452e-6■□□□□ 9
CSTF2TQ9H0L4 TMED10-204ENST00000555873 1161 ntTSL 1 (best)12.24□□□□□ -0.452e-6■□□□□ 9
CSTF2TQ9H0L4 TEX2-206ENST00000583738 458 ntTSL 312.02□□□□□ -0.492e-6■□□□□ 9
CSTF2TQ9H0L4 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC11.35□□□□□ -0.592e-8■□□□□ 9
CSTF2TQ9H0L4 ITGB1-202ENST00000396033 3784 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.672e-8■□□□□ 9
CSTF2TQ9H0L4 TEX2-201ENST00000258991 5232 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.792e-6■□□□□ 9
CSTF2TQ9H0L4 SLC26A6-221ENST00000494717 255 ntTSL 49.95□□□□□ -0.822e-6■□□□□ 9
CSTF2TQ9H0L4 TEX2-208ENST00000584379 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.852e-6■□□□□ 9
CSTF2TQ9H0L4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.322e-6■□□□□ 9
CSTF2TQ9H0L4 ITGB1-206ENST00000437302 445 ntTSL 55.24□□□□□ -1.572e-8■□□□□ 9
CSTF2TQ9H0L4 DGKQ-204ENST00000510286 473 ntTSL 315.49■□□□□ 0.072e-11■□□□□ 9
CSTF2TQ9H0L4 MORC3-206ENST00000492336 1290 ntTSL 1 (best)13.33□□□□□ -0.289e-7■□□□□ 9
CSTF2TQ9H0L4 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.289e-7■□□□□ 9
CSTF2TQ9H0L4 MORC3-205ENST00000487909 4131 ntTSL 25.01□□□□□ -1.619e-7■□□□□ 9
CSTF2TQ9H0L4 ARPC2-214ENST00000480062 508 ntTSL 224.14■■□□□ 1.452e-8■□□□□ 9
CSTF2TQ9H0L4 ARPC2-204ENST00000420104 482 ntTSL 323.6■■□□□ 1.372e-8■□□□□ 9
CSTF2TQ9H0L4 ARPC2-217ENST00000489598 1039 ntTSL 223.6■■□□□ 1.372e-8■□□□□ 9
CSTF2TQ9H0L4 ARPC2-203ENST00000414983 713 ntTSL 323.21■■□□□ 1.312e-8■□□□□ 9
CSTF2TQ9H0L4 ARPC2-218ENST00000491780 577 ntTSL 423.09■■□□□ 1.292e-8■□□□□ 9
CSTF2TQ9H0L4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.272e-8■□□□□ 9
CSTF2TQ9H0L4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.242e-8■□□□□ 9
CSTF2TQ9H0L4 ARPC2-205ENST00000420201 732 ntTSL 322.76■■□□□ 1.232e-8■□□□□ 9
CSTF2TQ9H0L4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.17■□□□□ 0.52e-8■□□□□ 9
CSTF2TQ9H0L4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.462e-8■□□□□ 9
CSTF2TQ9H0L4 ATG4B-216ENST00000475195 762 ntTSL 215.32■□□□□ 0.042e-8■□□□□ 9
CSTF2TQ9H0L4 ATG4B-203ENST00000400772 625 ntTSL 414.88□□□□□ -0.032e-8■□□□□ 9
CSTF2TQ9H0L4 ATG4B-218ENST00000479554 556 ntTSL 413.54□□□□□ -0.242e-8■□□□□ 9
CSTF2TQ9H0L4 ATG4B-214ENST00000465399 581 ntTSL 213.51□□□□□ -0.252e-8■□□□□ 9
CSTF2TQ9H0L4 ATG4B-222ENST00000491867 435 ntTSL 513.3□□□□□ -0.282e-8■□□□□ 9
CSTF2TQ9H0L4 ATG4B-208ENST00000419606 553 ntTSL 411.74□□□□□ -0.532e-8■□□□□ 9
CSTF2TQ9H0L4 ATG4B-207ENST00000415107 356 ntTSL 510.96□□□□□ -0.652e-8■□□□□ 9
CSTF2TQ9H0L4 AURKA-207ENST00000395914 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.662e-8■□□□□ 9
CSTF2TQ9H0L4 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.012e-8■□□□□ 9
CSTF2TQ9H0L4 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.112e-8■□□□□ 9
CSTF2TQ9H0L4 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.112e-8■□□□□ 9
CSTF2TQ9H0L4 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.172e-8■□□□□ 9
CSTF2TQ9H0L4 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.172e-8■□□□□ 9
CSTF2TQ9H0L4 ARPC2-213ENST00000478612 528 ntTSL 33.67□□□□□ -1.822e-8■□□□□ 9
CSTF2TQ9H0L4 NRIP1-205ENST00000637630 573 ntTSL 311.5□□□□□ -0.571e-9■□□□□ 9
CSTF2TQ9H0L4 NRIP1-206ENST00000637963 498 ntTSL 49.98□□□□□ -0.811e-9■□□□□ 9
CSTF2TQ9H0L4 PPP2R5C-216ENST00000556086 279 ntTSL 511.35□□□□□ -0.591e-12■□□□□ 9
CSTF2TQ9H0L4 PPP2R5C-206ENST00000553554 564 ntTSL 57.97□□□□□ -1.131e-12■□□□□ 9
CSTF2TQ9H0L4 PEAK1-209ENST00000567808 520 ntTSL 319.62■□□□□ 0.732e-6■□□□□ 9
CSTF2TQ9H0L4 PEAK1-210ENST00000569159 531 ntTSL 418.46■□□□□ 0.552e-6■□□□□ 9
CSTF2TQ9H0L4 PEAK1-206ENST00000564328 2323 ntTSL 518.32■□□□□ 0.522e-6■□□□□ 9
CSTF2TQ9H0L4 PEAK1-208ENST00000567337 555 ntTSL 416.15■□□□□ 0.182e-6■□□□□ 9
CSTF2TQ9H0L4 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.05□□□□□ -1.282e-6■□□□□ 9
CSTF2TQ9H0L4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.612e-6■□□□□ 9
CSTF2TQ9H0L4 TTC3-216ENST00000479930 8998 ntTSL 1 (best)9.33□□□□□ -0.924e-11■□□□□ 9
CSTF2TQ9H0L4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.414e-11■□□□□ 9
CSTF2TQ9H0L4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.594e-11■□□□□ 9
CSTF2TQ9H0L4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.43■□□□□ 0.861e-8■□□□□ 9
CSTF2TQ9H0L4 FUS-213ENST00000570090 544 ntTSL 217.09■□□□□ 0.331e-8■□□□□ 9
CSTF2TQ9H0L4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.171e-8■□□□□ 9
CSTF2TQ9H0L4 SYNJ2-206ENST00000485863 810 ntTSL 317.7■□□□□ 0.427e-7■□□□□ 9
CSTF2TQ9H0L4 PHF14-214ENST00000521747 2479 ntTSL 220.73■□□□□ 0.912e-6■□□□□ 9
CSTF2TQ9H0L4 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC10.4□□□□□ -0.742e-6■□□□□ 9
CSTF2TQ9H0L4 PEPD-207ENST00000590408 433 ntTSL 39.3□□□□□ -0.922e-6■□□□□ 9
CSTF2TQ9H0L4 AC008667.1-201ENST00000515296 568 ntTSL 4 BASIC9.1□□□□□ -0.952e-6■□□□□ 9
CSTF2TQ9H0L4 AC015688.5-202ENST00000579290 532 ntAPPRIS ALT2 TSL 29.1□□□□□ -0.952e-6■□□□□ 9
CSTF2TQ9H0L4 UBE2D3-224ENST00000508474 4819 ntTSL 27.1□□□□□ -1.272e-6■□□□□ 9
CSTF2TQ9H0L4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.782e-6■□□□□ 9
CSTF2TQ9H0L4 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.61□□□□□ -0.234e-39■□□□□ 9
CSTF2TQ9H0L4 uc_338.2-201ENST00000612963 182 ntBASIC8.09□□□□□ -1.114e-39■□□□□ 9
CSTF2TQ9H0L4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.312e-7■□□□□ 9
CSTF2TQ9H0L4 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC11.44□□□□□ -0.582e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.454e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-217ENST00000469377 3151 ntTSL 25.55□□□□□ -1.524e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.39□□□□□ -1.554e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.24□□□□□ -1.574e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.02□□□□□ -1.614e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.66□□□□□ -1.664e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.38□□□□□ -1.714e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.724e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.734e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.734e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.85□□□□□ -1.794e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.794e-7■□□□□ 9
CSTF2TQ9H0L4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.59□□□□□ -1.834e-7■□□□□ 9
CSTF2TQ9H0L4 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.58□□□□□ -0.555e-8■□□□□ 8.9
CSTF2TQ9H0L4 USP11-207ENST00000478596 970 ntTSL 313.62□□□□□ -0.232e-6■□□□□ 8.9
CSTF2TQ9H0L4 USP11-206ENST00000469080 3467 ntTSL 1 (best)11.85□□□□□ -0.512e-6■□□□□ 8.9
Retrieved 100 of 19,151 protein–RNA pairs in 445.6 ms