RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
ATG4B-208ENST00000419606 CCDC180Q9P1Z9 1646 aa26.74■■□□□ 1.87
ATG4B-208ENST00000419606 ABCC9O60706 1549 aa25.82■■□□□ 1.72
ATG4B-208ENST00000419606 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
ATG4B-208ENST00000419606 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
ATG4B-208ENST00000419606 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
ATG4B-208ENST00000419606 NACADO15069 1562 aa25.01■■□□□ 1.59
ATG4B-208ENST00000419606 MYO15BQ96JP2 1530 aa24.97■■□□□ 1.59
ATG4B-208ENST00000419606 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
ATG4B-208ENST00000419606 SCRIBQ14160 1630 aa24.54■■□□□ 1.52
ATG4B-208ENST00000419606 UNC13AQ9UPW8 1703 aa24.51■■□□□ 1.51
ATG4B-208ENST00000419606 SHROOM4Q9ULL8 1493 aa24.39■■□□□ 1.5
ATG4B-208ENST00000419606 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
ATG4B-208ENST00000419606 PABPN1Q86U42 306 aaKnown RBP eCLIP24.24■■□□□ 1.47
ATG4B-208ENST00000419606 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
ATG4B-208ENST00000419606 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
ATG4B-208ENST00000419606 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
ATG4B-208ENST00000419606 MROH2BQ7Z745 1585 aa23.47■■□□□ 1.35
ATG4B-208ENST00000419606 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
ATG4B-208ENST00000419606 CC2D2AQ9P2K1 1620 aa23.35■■□□□ 1.33
ATG4B-208ENST00000419606 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
ATG4B-208ENST00000419606 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
ATG4B-208ENST00000419606 WIZO95785 1651 aa23.26■■□□□ 1.31
ATG4B-208ENST00000419606 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
ATG4B-208ENST00000419606 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
ATG4B-208ENST00000419606 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
ATG4B-208ENST00000419606 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
ATG4B-208ENST00000419606 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
ATG4B-208ENST00000419606 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
ATG4B-208ENST00000419606 HMGXB3Q12766 1538 aa23.02■■□□□ 1.28
ATG4B-208ENST00000419606 TOP2AP11388 1531 aaKnown RBP22.96■■□□□ 1.27
ATG4B-208ENST00000419606 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
ATG4B-208ENST00000419606 NESP48681 1621 aa22.52■■□□□ 1.2
ATG4B-208ENST00000419606 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
ATG4B-208ENST00000419606 CFTRP13569 1480 aa22.43■■□□□ 1.18
ATG4B-208ENST00000419606 LAMC3Q9Y6N6 1575 aa22.41■■□□□ 1.18
ATG4B-208ENST00000419606 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
ATG4B-208ENST00000419606 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
ATG4B-208ENST00000419606 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
ATG4B-208ENST00000419606 PDS5BQ9NTI5 1447 aa22.22■■□□□ 1.15
ATG4B-208ENST00000419606 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
ATG4B-208ENST00000419606 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
ATG4B-208ENST00000419606 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
ATG4B-208ENST00000419606 THOC2Q8NI27 1593 aaKnown RBP22.02■■□□□ 1.12
ATG4B-208ENST00000419606 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
ATG4B-208ENST00000419606 MRC2Q9UBG0 1479 aa22.01■■□□□ 1.11
ATG4B-208ENST00000419606 CUX1P39880 1505 aa21.97■■□□□ 1.11
ATG4B-208ENST00000419606 WRNQ14191 1432 aaPredicted RBP eCLIP21.96■■□□□ 1.11
ATG4B-208ENST00000419606 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
ATG4B-208ENST00000419606 DNMBPQ6XZF7 1577 aa21.93■■□□□ 1.1
ATG4B-208ENST00000419606 TOPBP1Q92547 1522 aa21.93■■□□□ 1.1
ATG4B-208ENST00000419606 WDR62O43379 1518 aa21.92■■□□□ 1.1
ATG4B-208ENST00000419606 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
ATG4B-208ENST00000419606 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
ATG4B-208ENST00000419606 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
ATG4B-208ENST00000419606 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
ATG4B-208ENST00000419606 POLA1P09884 1462 aaPredicted RBP21.78■■□□□ 1.08
ATG4B-208ENST00000419606 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
ATG4B-208ENST00000419606 CUX2O14529 1486 aa21.76■■□□□ 1.07
ATG4B-208ENST00000419606 RAD54L2Q9Y4B4 1467 aa21.73■■□□□ 1.07
ATG4B-208ENST00000419606 SOGA1O94964 1423 aa21.69■■□□□ 1.06
ATG4B-208ENST00000419606 TARBP1Q13395 1621 aaKnown RBP21.68■■□□□ 1.06
ATG4B-208ENST00000419606 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
ATG4B-208ENST00000419606 WDR97A6NE52 1622 aa21.62■■□□□ 1.05
ATG4B-208ENST00000419606 ZNF608Q9ULD9 1512 aaPredicted RBP21.59■■□□□ 1.05
ATG4B-208ENST00000419606 ABCA10Q8WWZ4 1543 aa21.57■■□□□ 1.04
ATG4B-208ENST00000419606 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
ATG4B-208ENST00000419606 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
ATG4B-208ENST00000419606 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.032e-11■■■□□ 18.5
ATG4B-208ENST00000419606 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
ATG4B-208ENST00000419606 ABCA5Q8WWZ7 1642 aa21.48■■□□□ 1.03
ATG4B-208ENST00000419606 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
ATG4B-208ENST00000419606 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
ATG4B-208ENST00000419606 FAM9AQ8IZU1 332 aaPredicted RBP21.42■■□□□ 1.02
ATG4B-208ENST00000419606 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
ATG4B-208ENST00000419606 GRIN2BQ13224 1484 aa21.35■■□□□ 1.01
ATG4B-208ENST00000419606 IGF1RP08069 1367 aa21.34■■□□□ 1.01
ATG4B-208ENST00000419606 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
ATG4B-208ENST00000419606 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
ATG4B-208ENST00000419606 EEA1Q15075 1411 aa21.29■■□□□ 1
ATG4B-208ENST00000419606 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
ATG4B-208ENST00000419606 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
ATG4B-208ENST00000419606 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
ATG4B-208ENST00000419606 CUL7Q14999 1698 aa21.21■□□□□ 0.99
ATG4B-208ENST00000419606 DNAJC5Q9H3Z4 198 aa21.21■□□□□ 0.99
ATG4B-208ENST00000419606 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
ATG4B-208ENST00000419606 FHAD1B1AJZ9 1412 aa21.18■□□□□ 0.98
ATG4B-208ENST00000419606 PRXQ9BXM0 1461 aa21.18■□□□□ 0.98
ATG4B-208ENST00000419606 CHD1O14646 1710 aa21.16■□□□□ 0.98
ATG4B-208ENST00000419606 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
ATG4B-208ENST00000419606 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
ATG4B-208ENST00000419606 FBLN2P98095 1184 aa21.15■□□□□ 0.98
ATG4B-208ENST00000419606 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
ATG4B-208ENST00000419606 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
ATG4B-208ENST00000419606 KIF21BO75037 1637 aa21.11■□□□□ 0.97
ATG4B-208ENST00000419606 GRIN2AQ12879 1464 aa21.1■□□□□ 0.97
ATG4B-208ENST00000419606 LOC105371045A0A1W2PR82 267 aa21.04■□□□□ 0.96
ATG4B-208ENST00000419606 CEP170Q5SW79 1584 aa21.02■□□□□ 0.96
ATG4B-208ENST00000419606 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
ATG4B-208ENST00000419606 NUP160Q12769 1436 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms