Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CSNK1G3Q9Y6M4 AC021242.3-201ENST00000607598 1377 ntBASIC23.31■■□□□ 1.32
CSNK1G3Q9Y6M4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CSNK1G3Q9Y6M4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.31■■□□□ 1.32
CSNK1G3Q9Y6M4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CSNK1G3Q9Y6M4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
CSNK1G3Q9Y6M4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CSNK1G3Q9Y6M4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.31■■□□□ 1.32
CSNK1G3Q9Y6M4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CSNK1G3Q9Y6M4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CSNK1G3Q9Y6M4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CSNK1G3Q9Y6M4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CSNK1G3Q9Y6M4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.3■■□□□ 1.32
CSNK1G3Q9Y6M4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.3■■□□□ 1.32
CSNK1G3Q9Y6M4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CSNK1G3Q9Y6M4 AL121749.1-202ENST00000609313 2153 ntBASIC23.3■■□□□ 1.32
CSNK1G3Q9Y6M4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CSNK1G3Q9Y6M4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.29■■□□□ 1.32
CSNK1G3Q9Y6M4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CSNK1G3Q9Y6M4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CSNK1G3Q9Y6M4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSNK1G3Q9Y6M4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CSNK1G3Q9Y6M4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSNK1G3Q9Y6M4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSNK1G3Q9Y6M4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.28■■□□□ 1.32
CSNK1G3Q9Y6M4 UNC93B8-201ENST00000511903 705 ntBASIC23.28■■□□□ 1.32
CSNK1G3Q9Y6M4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.28■■□□□ 1.32
CSNK1G3Q9Y6M4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.28■■□□□ 1.32
CSNK1G3Q9Y6M4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.28■■□□□ 1.32
CSNK1G3Q9Y6M4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CSNK1G3Q9Y6M4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CSNK1G3Q9Y6M4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CSNK1G3Q9Y6M4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.27■■□□□ 1.32
CSNK1G3Q9Y6M4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.27■■□□□ 1.32
CSNK1G3Q9Y6M4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.27■■□□□ 1.32
CSNK1G3Q9Y6M4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.27■■□□□ 1.32
CSNK1G3Q9Y6M4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.27■■□□□ 1.32
CSNK1G3Q9Y6M4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSNK1G3Q9Y6M4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CSNK1G3Q9Y6M4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSNK1G3Q9Y6M4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CSNK1G3Q9Y6M4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CSNK1G3Q9Y6M4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
CSNK1G3Q9Y6M4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.25■■□□□ 1.31
CSNK1G3Q9Y6M4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CSNK1G3Q9Y6M4 KRT16P3-201ENST00000439127 1283 ntBASIC23.25■■□□□ 1.31
CSNK1G3Q9Y6M4 MIR4281-201ENST00000580852 62 ntBASIC23.25■■□□□ 1.31
CSNK1G3Q9Y6M4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CSNK1G3Q9Y6M4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CSNK1G3Q9Y6M4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSNK1G3Q9Y6M4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSNK1G3Q9Y6M4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.24■■□□□ 1.31
CSNK1G3Q9Y6M4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.24■■□□□ 1.31
CSNK1G3Q9Y6M4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.24■■□□□ 1.31
CSNK1G3Q9Y6M4 AC011551.1-201ENST00000614101 683 ntBASIC23.24■■□□□ 1.31
CSNK1G3Q9Y6M4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSNK1G3Q9Y6M4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CSNK1G3Q9Y6M4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CSNK1G3Q9Y6M4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSNK1G3Q9Y6M4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.23■■□□□ 1.31
CSNK1G3Q9Y6M4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
CSNK1G3Q9Y6M4 AC092028.1-203ENST00000608262 953 ntBASIC23.23■■□□□ 1.31
CSNK1G3Q9Y6M4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSNK1G3Q9Y6M4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.23■■□□□ 1.31
CSNK1G3Q9Y6M4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSNK1G3Q9Y6M4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CSNK1G3Q9Y6M4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 AC008406.3-201ENST00000620001 1374 ntBASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CSNK1G3Q9Y6M4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.21■■□□□ 1.31
CSNK1G3Q9Y6M4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.21■■□□□ 1.31
CSNK1G3Q9Y6M4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CSNK1G3Q9Y6M4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.21■■□□□ 1.31
CSNK1G3Q9Y6M4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CSNK1G3Q9Y6M4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CSNK1G3Q9Y6M4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CSNK1G3Q9Y6M4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CSNK1G3Q9Y6M4 AC019069.1-201ENST00000610008 1333 ntBASIC23.2■■□□□ 1.3
CSNK1G3Q9Y6M4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.2■■□□□ 1.3
CSNK1G3Q9Y6M4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.2■■□□□ 1.3
CSNK1G3Q9Y6M4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.2■■□□□ 1.3
CSNK1G3Q9Y6M4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.2■■□□□ 1.3
CSNK1G3Q9Y6M4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G3Q9Y6M4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G3Q9Y6M4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G3Q9Y6M4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G3Q9Y6M4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G3Q9Y6M4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.19■■□□□ 1.3
CSNK1G3Q9Y6M4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.19■■□□□ 1.3
CSNK1G3Q9Y6M4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CSNK1G3Q9Y6M4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSNK1G3Q9Y6M4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CSNK1G3Q9Y6M4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms