Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01006Q8NI28 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01006Q8NI28 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01006Q8NI28 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01006Q8NI28 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01006Q8NI28 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
LINC01006Q8NI28 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.68■□□□□ 0.58
LINC01006Q8NI28 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC01006Q8NI28 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LINC01006Q8NI28 AC011551.1-201ENST00000614101 683 ntBASIC18.68■□□□□ 0.58
LINC01006Q8NI28 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
LINC01006Q8NI28 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01006Q8NI28 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01006Q8NI28 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01006Q8NI28 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01006Q8NI28 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LINC01006Q8NI28 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01006Q8NI28 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01006Q8NI28 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.66■□□□□ 0.58
LINC01006Q8NI28 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC01006Q8NI28 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.66■□□□□ 0.58
LINC01006Q8NI28 AC010997.5-201ENST00000609182 354 ntBASIC18.66■□□□□ 0.58
LINC01006Q8NI28 AC142086.6-201ENST00000621154 1765 ntBASIC18.65■□□□□ 0.58
LINC01006Q8NI28 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01006Q8NI28 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01006Q8NI28 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.65■□□□□ 0.58
LINC01006Q8NI28 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01006Q8NI28 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01006Q8NI28 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01006Q8NI28 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01006Q8NI28 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01006Q8NI28 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01006Q8NI28 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01006Q8NI28 AC131281.2-201ENST00000520478 145 ntBASIC18.64■□□□□ 0.57
LINC01006Q8NI28 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.64■□□□□ 0.57
LINC01006Q8NI28 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01006Q8NI28 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01006Q8NI28 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01006Q8NI28 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.63■□□□□ 0.57
LINC01006Q8NI28 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01006Q8NI28 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LINC01006Q8NI28 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.63■□□□□ 0.57
LINC01006Q8NI28 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01006Q8NI28 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.63■□□□□ 0.57
LINC01006Q8NI28 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC01006Q8NI28 MIR935-201ENST00000401179 91 ntBASIC18.62■□□□□ 0.57
LINC01006Q8NI28 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
LINC01006Q8NI28 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC01006Q8NI28 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC01006Q8NI28 MTDHP2-201ENST00000601468 714 ntBASIC18.62■□□□□ 0.57
LINC01006Q8NI28 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC01006Q8NI28 MIR6724-1-201ENST00000616420 92 ntBASIC18.62■□□□□ 0.57
LINC01006Q8NI28 MIR6724-2-201ENST00000616483 92 ntBASIC18.62■□□□□ 0.57
LINC01006Q8NI28 MIR6724-4-201ENST00000617390 92 ntBASIC18.62■□□□□ 0.57
LINC01006Q8NI28 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC01006Q8NI28 MIR6724-3-201ENST00000622482 92 ntBASIC18.62■□□□□ 0.57
LINC01006Q8NI28 AL117332.1-201ENST00000622628 974 ntBASIC18.62■□□□□ 0.57
LINC01006Q8NI28 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC01006Q8NI28 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.61■□□□□ 0.57
LINC01006Q8NI28 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01006Q8NI28 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01006Q8NI28 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LINC01006Q8NI28 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LINC01006Q8NI28 MIR638-201ENST00000385237 100 ntBASIC18.61■□□□□ 0.57
LINC01006Q8NI28 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.61■□□□□ 0.57
LINC01006Q8NI28 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01006Q8NI28 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC01006Q8NI28 AL139246.5-201ENST00000606645 996 ntBASIC18.61■□□□□ 0.57
LINC01006Q8NI28 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LINC01006Q8NI28 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.6■□□□□ 0.57
LINC01006Q8NI28 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01006Q8NI28 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC01006Q8NI28 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.6■□□□□ 0.57
LINC01006Q8NI28 MIR3621-201ENST00000580529 85 ntBASIC18.6■□□□□ 0.57
LINC01006Q8NI28 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LINC01006Q8NI28 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 AL136116.3-201ENST00000402907 1138 ntBASIC18.59■□□□□ 0.57
LINC01006Q8NI28 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC01006Q8NI28 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC01006Q8NI28 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC01006Q8NI28 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC01006Q8NI28 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LINC01006Q8NI28 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms