Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.32■□□□□ 0.68
BRD3OSQ6XYD6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.32■□□□□ 0.68
BRD3OSQ6XYD6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BRD3OSQ6XYD6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRD3OSQ6XYD6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BRD3OSQ6XYD6 KRT18P24-201ENST00000344739 1156 ntBASIC19.31■□□□□ 0.68
BRD3OSQ6XYD6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
BRD3OSQ6XYD6 AC120024.1-201ENST00000562672 995 ntBASIC19.31■□□□□ 0.68
BRD3OSQ6XYD6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
BRD3OSQ6XYD6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BRD3OSQ6XYD6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BRD3OSQ6XYD6 BX664725.1-201ENST00000438252 379 ntBASIC19.3■□□□□ 0.68
BRD3OSQ6XYD6 KRT125P-201ENST00000546827 989 ntBASIC19.3■□□□□ 0.68
BRD3OSQ6XYD6 Z92544.1-202ENST00000571933 1220 ntBASIC19.3■□□□□ 0.68
BRD3OSQ6XYD6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRD3OSQ6XYD6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRD3OSQ6XYD6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRD3OSQ6XYD6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRD3OSQ6XYD6 AL592295.1-201ENST00000400984 884 ntBASIC19.29■□□□□ 0.68
BRD3OSQ6XYD6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.29■□□□□ 0.68
BRD3OSQ6XYD6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRD3OSQ6XYD6 ERN1-208ENST00000606895 2068 ntBASIC19.29■□□□□ 0.68
BRD3OSQ6XYD6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRD3OSQ6XYD6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.29■□□□□ 0.68
BRD3OSQ6XYD6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD3OSQ6XYD6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BRD3OSQ6XYD6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRD3OSQ6XYD6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 AL356441.2-201ENST00000443009 864 ntBASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.27■□□□□ 0.68
BRD3OSQ6XYD6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BRD3OSQ6XYD6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRD3OSQ6XYD6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRD3OSQ6XYD6 AL121749.1-202ENST00000609313 2153 ntBASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 MIR4787-201ENST00000607364 84 ntBASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRD3OSQ6XYD6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRD3OSQ6XYD6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRD3OSQ6XYD6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.23■□□□□ 0.67
BRD3OSQ6XYD6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.23■□□□□ 0.67
BRD3OSQ6XYD6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.23■□□□□ 0.67
BRD3OSQ6XYD6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRD3OSQ6XYD6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRD3OSQ6XYD6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRD3OSQ6XYD6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.22■□□□□ 0.67
BRD3OSQ6XYD6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BRD3OSQ6XYD6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.22■□□□□ 0.67
BRD3OSQ6XYD6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.22■□□□□ 0.67
BRD3OSQ6XYD6 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.22■□□□□ 0.67
BRD3OSQ6XYD6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 MIR4281-201ENST00000580852 62 ntBASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRD3OSQ6XYD6 AC096887.2-201ENST00000623443 1957 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms