Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 ICL1YER065C 1674 nt5.81□□□□□ -1.48
TY2A-LR1P0C2J4 YLL067CYLL067C 3618 nt5.81□□□□□ -1.48
TY2A-LR1P0C2J4 SGE1YPR198W 1632 nt5.81□□□□□ -1.48
TY2A-LR1P0C2J4 MKC7YDR144C 1791 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 VMS1YDR049W 1899 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 WHI2YOR043W 1461 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 YDR278CYDR278C 318 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 PCL6YER059W 1263 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 TSA1YML028W 591 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 YMR119W-AYMR119W-A 375 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 MTF1YMR228W 1026 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 DDC1YPL194W 1839 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 GIT1YCR098C 1557 nt5.8□□□□□ -1.48
TY2A-LR1P0C2J4 GPI11YDR302W 660 nt5.79□□□□□ -1.48
TY2A-LR1P0C2J4 BCY1YIL033C 1251 nt5.79□□□□□ -1.48
TY2A-LR1P0C2J4 PML1YLR016C 615 nt5.79□□□□□ -1.48
TY2A-LR1P0C2J4 MRPS16YPL013C 366 nt5.79□□□□□ -1.48
TY2A-LR1P0C2J4 SVF1YDR346C 1446 nt5.79□□□□□ -1.48
TY2A-LR1P0C2J4 SRV2YNL138W 1581 nt5.79□□□□□ -1.48
TY2A-LR1P0C2J4 UTP4YDR324C 2331 nt5.79□□□□□ -1.48
TY2A-LR1P0C2J4 AVO1YOL078W 3531 nt5.78□□□□□ -1.48
TY2A-LR1P0C2J4 GUD1YDL238C 1470 nt5.78□□□□□ -1.48
TY2A-LR1P0C2J4 YDR034W-BYDR034W-B 156 nt5.78□□□□□ -1.48
TY2A-LR1P0C2J4 QRI5YLR204W 336 nt5.78□□□□□ -1.48
TY2A-LR1P0C2J4 YNR068CYNR068C 819 nt5.78□□□□□ -1.48
TY2A-LR1P0C2J4 HXT17YNR072W 1695 nt5.78□□□□□ -1.48
TY2A-LR1P0C2J4 GPB2YAL056W 2643 nt5.78□□□□□ -1.48
TY2A-LR1P0C2J4 UTP6YDR449C 1323 nt5.77□□□□□ -1.49
TY2A-LR1P0C2J4 PCL10YGL134W 1302 nt5.77□□□□□ -1.49
TY2A-LR1P0C2J4 HST3YOR025W 1344 nt5.77□□□□□ -1.49
TY2A-LR1P0C2J4 RPT3YDR394W 1287 nt5.77□□□□□ -1.49
TY2A-LR1P0C2J4 YEL068CYEL068C 333 nt5.77□□□□□ -1.49
TY2A-LR1P0C2J4 BUR6YER159C 429 nt5.77□□□□□ -1.49
TY2A-LR1P0C2J4 LYS12YIL094C 1116 nt5.77□□□□□ -1.49
TY2A-LR1P0C2J4 AIM41YOR215C 558 nt5.77□□□□□ -1.49
TY2A-LR1P0C2J4 PYC2YBR218C 3543 nt5.77□□□□□ -1.49
TY2A-LR1P0C2J4 CLD1YGR110W 1338 nt5.76□□□□□ -1.49
TY2A-LR1P0C2J4 YUR1YJL139C 1287 nt5.76□□□□□ -1.49
TY2A-LR1P0C2J4 TAF4YMR005W 1167 nt5.76□□□□□ -1.49
TY2A-LR1P0C2J4 DAP1YPL170W 459 nt5.76□□□□□ -1.49
TY2A-LR1P0C2J4 YDR387CYDR387C 1668 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 MDM31YHR194W 1740 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 AAD6YFL056C 639 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 DOT5YIL010W 648 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 PRE3YJL001W 648 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 RPS5YJR123W 678 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 HAP3YBL021C 435 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 JNM1YMR294W 1122 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 MRPS12YNR036C 462 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 YPR114WYPR114W 948 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 RKM4YDR257C 1485 nt5.75□□□□□ -1.49
TY2A-LR1P0C2J4 TEP1YNL128W 1305 nt5.74□□□□□ -1.49
TY2A-LR1P0C2J4 SPO77YLR341W 1434 nt5.74□□□□□ -1.49
TY2A-LR1P0C2J4 URA7YBL039C 1740 nt5.74□□□□□ -1.49
TY2A-LR1P0C2J4 MAD2YJL030W 591 nt5.74□□□□□ -1.49
TY2A-LR1P0C2J4 GLN1YPR035W 1113 nt5.74□□□□□ -1.49
TY2A-LR1P0C2J4 CEF1YMR213W 1773 nt5.73□□□□□ -1.49
TY2A-LR1P0C2J4 MOG1YJR074W 657 nt5.73□□□□□ -1.49
TY2A-LR1P0C2J4 AVT4YNL101W 2142 nt5.73□□□□□ -1.49
TY2A-LR1P0C2J4 YOL163WYOL163W 510 nt5.73□□□□□ -1.49
TY2A-LR1P0C2J4 RPS28AYOR167C 204 nt5.73□□□□□ -1.49
TY2A-LR1P0C2J4 ASN1YPR145W 1719 nt5.73□□□□□ -1.49
TY2A-LR1P0C2J4 KKQ8YKL168C 2175 nt5.73□□□□□ -1.49
TY2A-LR1P0C2J4 ISC1YER019W 1434 nt5.73□□□□□ -1.49
TY2A-LR1P0C2J4 YLH47YPR125W 1365 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 UTP9YHR196W 1728 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 PGK1YCR012W 1251 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 YDL129WYDL129W 876 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 SOH1YGL127C 384 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 RAI1YGL246C 1164 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 BUD32YGR262C 786 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 tR(ACG)DtR(ACG)D 73 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 tR(ACG)EtR(ACG)E 73 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 tR(ACG)KtR(ACG)K 73 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 tR(ACG)LtR(ACG)L 73 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 tR(ACG)OtR(ACG)O 73 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 SNN1YNL086W 309 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 YOL035CYOL035C 303 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 IFA38YBR159W 1044 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 VRP1YLR337C 2454 nt5.72□□□□□ -1.49
TY2A-LR1P0C2J4 SKS1YPL026C 1509 nt5.71□□□□□ -1.5
TY2A-LR1P0C2J4 YKR075CYKR075C 924 nt5.71□□□□□ -1.5
TY2A-LR1P0C2J4 YMR135W-AYMR135W-A 534 nt5.71□□□□□ -1.5
TY2A-LR1P0C2J4 YNL042W-BYNL042W-B 258 nt5.71□□□□□ -1.5
TY2A-LR1P0C2J4 YPR160C-AYPR160C-A 285 nt5.71□□□□□ -1.5
TY2A-LR1P0C2J4 IMG2YCR071C 441 nt5.7□□□□□ -1.5
TY2A-LR1P0C2J4 YHR095WYHR095W 495 nt5.7□□□□□ -1.5
TY2A-LR1P0C2J4 YML083CYML083C 1257 nt5.7□□□□□ -1.5
TY2A-LR1P0C2J4 CIN4YMR138W 576 nt5.7□□□□□ -1.5
TY2A-LR1P0C2J4 OSW5YMR148W 447 nt5.7□□□□□ -1.5
TY2A-LR1P0C2J4 ATG4YNL223W 1485 nt5.7□□□□□ -1.5
TY2A-LR1P0C2J4 HXT2YMR011W 1626 nt5.7□□□□□ -1.5
TY2A-LR1P0C2J4 TPO3YPR156C 1869 nt5.69□□□□□ -1.5
TY2A-LR1P0C2J4 YHL017WYHL017W 1599 nt5.69□□□□□ -1.5
TY2A-LR1P0C2J4 SPG1YGR236C 288 nt5.69□□□□□ -1.5
TY2A-LR1P0C2J4 YIR018C-AYIR018C-A 138 nt5.69□□□□□ -1.5
TY2A-LR1P0C2J4 YPR123CYPR123C 435 nt5.69□□□□□ -1.5
TY2A-LR1P0C2J4 PEX32YBR168W 1242 nt5.69□□□□□ -1.5
TY2A-LR1P0C2J4 MNN5YJL186W 1761 nt5.69□□□□□ -1.5
TY2A-LR1P0C2J4 RAD24YER173W 1980 nt5.69□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 8.8 ms