Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PDZRN3Q9UPQ7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDZRN3Q9UPQ7 WHAMMP3-201ENST00000611636 1609 ntBASIC30.83■■■□□ 2.53
PDZRN3Q9UPQ7 AC145676.1-201ENST00000514988 2004 ntBASIC30.83■■■□□ 2.53
PDZRN3Q9UPQ7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.83■■■□□ 2.53
PDZRN3Q9UPQ7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
PDZRN3Q9UPQ7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.82■■■□□ 2.52
PDZRN3Q9UPQ7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
PDZRN3Q9UPQ7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PDZRN3Q9UPQ7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PDZRN3Q9UPQ7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.81■■■□□ 2.52
PDZRN3Q9UPQ7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PDZRN3Q9UPQ7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PDZRN3Q9UPQ7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PDZRN3Q9UPQ7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC30.8■■■□□ 2.52
PDZRN3Q9UPQ7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
PDZRN3Q9UPQ7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PDZRN3Q9UPQ7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDZRN3Q9UPQ7 AC142472.1-201ENST00000612013 1741 ntBASIC30.79■■■□□ 2.52
PDZRN3Q9UPQ7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDZRN3Q9UPQ7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDZRN3Q9UPQ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDZRN3Q9UPQ7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.79■■■□□ 2.52
PDZRN3Q9UPQ7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PDZRN3Q9UPQ7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDZRN3Q9UPQ7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDZRN3Q9UPQ7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 Z92544.1-202ENST00000571933 1220 ntBASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDZRN3Q9UPQ7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PDZRN3Q9UPQ7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.77■■■□□ 2.52
PDZRN3Q9UPQ7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PDZRN3Q9UPQ7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.77■■■□□ 2.52
PDZRN3Q9UPQ7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC30.77■■■□□ 2.52
PDZRN3Q9UPQ7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
PDZRN3Q9UPQ7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PDZRN3Q9UPQ7 AC092803.2-201ENST00000564287 1899 ntBASIC30.76■■■□□ 2.52
PDZRN3Q9UPQ7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.76■■■□□ 2.51
PDZRN3Q9UPQ7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PDZRN3Q9UPQ7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PDZRN3Q9UPQ7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
PDZRN3Q9UPQ7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.75■■■□□ 2.51
PDZRN3Q9UPQ7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.75■■■□□ 2.51
PDZRN3Q9UPQ7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.74■■■□□ 2.51
PDZRN3Q9UPQ7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
PDZRN3Q9UPQ7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.74■■■□□ 2.51
PDZRN3Q9UPQ7 AC135731.1-201ENST00000569415 2548 ntBASIC30.74■■■□□ 2.51
PDZRN3Q9UPQ7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PDZRN3Q9UPQ7 AC087393.1-201ENST00000582896 145 ntBASIC30.73■■■□□ 2.51
PDZRN3Q9UPQ7 AL359504.2-201ENST00000605506 1601 ntBASIC30.73■■■□□ 2.51
PDZRN3Q9UPQ7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PDZRN3Q9UPQ7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PDZRN3Q9UPQ7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PDZRN3Q9UPQ7 DUSP8P4-201ENST00000399538 1761 ntBASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDZRN3Q9UPQ7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
PDZRN3Q9UPQ7 AC239859.2-201ENST00000444165 318 ntBASIC30.7■■■□□ 2.51
PDZRN3Q9UPQ7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PDZRN3Q9UPQ7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.7■■■□□ 2.5
PDZRN3Q9UPQ7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.7■■■□□ 2.5
PDZRN3Q9UPQ7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PDZRN3Q9UPQ7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PDZRN3Q9UPQ7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PDZRN3Q9UPQ7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PDZRN3Q9UPQ7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.69■■■□□ 2.5
PDZRN3Q9UPQ7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PDZRN3Q9UPQ7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.69■■■□□ 2.5
PDZRN3Q9UPQ7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PDZRN3Q9UPQ7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.68■■■□□ 2.5
PDZRN3Q9UPQ7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.68■■■□□ 2.5
PDZRN3Q9UPQ7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PDZRN3Q9UPQ7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PDZRN3Q9UPQ7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PDZRN3Q9UPQ7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PDZRN3Q9UPQ7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDZRN3Q9UPQ7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDZRN3Q9UPQ7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDZRN3Q9UPQ7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDZRN3Q9UPQ7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDZRN3Q9UPQ7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
PDZRN3Q9UPQ7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.67■■■□□ 2.5
PDZRN3Q9UPQ7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms