Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.83■■□□□ 1.41
LDB1Q86U70 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LDB1Q86U70 AC009831.1-201ENST00000580420 1582 ntBASIC23.83■■□□□ 1.41
LDB1Q86U70 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LDB1Q86U70 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LDB1Q86U70 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
LDB1Q86U70 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LDB1Q86U70 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
LDB1Q86U70 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LDB1Q86U70 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LDB1Q86U70 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LDB1Q86U70 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.82■■□□□ 1.4
LDB1Q86U70 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LDB1Q86U70 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LDB1Q86U70 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LDB1Q86U70 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LDB1Q86U70 RARRES2P2-201ENST00000394842 485 ntBASIC23.81■■□□□ 1.4
LDB1Q86U70 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LDB1Q86U70 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.81■■□□□ 1.4
LDB1Q86U70 AC097639.1-201ENST00000565519 1891 ntBASIC23.81■■□□□ 1.4
LDB1Q86U70 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.81■■□□□ 1.4
LDB1Q86U70 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.81■■□□□ 1.4
LDB1Q86U70 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.8■■□□□ 1.4
LDB1Q86U70 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
LDB1Q86U70 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.8■■□□□ 1.4
LDB1Q86U70 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LDB1Q86U70 AC133552.2-201ENST00000619106 1032 ntBASIC23.8■■□□□ 1.4
LDB1Q86U70 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LDB1Q86U70 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LDB1Q86U70 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LDB1Q86U70 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.79■■□□□ 1.4
LDB1Q86U70 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LDB1Q86U70 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LDB1Q86U70 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LDB1Q86U70 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
LDB1Q86U70 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.79■■□□□ 1.4
LDB1Q86U70 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LDB1Q86U70 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LDB1Q86U70 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
LDB1Q86U70 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LDB1Q86U70 AC022211.4-201ENST00000625094 2161 ntBASIC23.78■■□□□ 1.4
LDB1Q86U70 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LDB1Q86U70 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LDB1Q86U70 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LDB1Q86U70 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LDB1Q86U70 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LDB1Q86U70 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LDB1Q86U70 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LDB1Q86U70 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
LDB1Q86U70 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
LDB1Q86U70 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LDB1Q86U70 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.77■■□□□ 1.4
LDB1Q86U70 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LDB1Q86U70 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LDB1Q86U70 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.77■■□□□ 1.4
LDB1Q86U70 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LDB1Q86U70 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LDB1Q86U70 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.77■■□□□ 1.4
LDB1Q86U70 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LDB1Q86U70 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.77■■□□□ 1.4
LDB1Q86U70 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LDB1Q86U70 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
LDB1Q86U70 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.76■■□□□ 1.39
LDB1Q86U70 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
LDB1Q86U70 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LDB1Q86U70 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LDB1Q86U70 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LDB1Q86U70 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
LDB1Q86U70 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LDB1Q86U70 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LDB1Q86U70 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LDB1Q86U70 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LDB1Q86U70 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.75■■□□□ 1.39
LDB1Q86U70 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.75■■□□□ 1.39
LDB1Q86U70 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LDB1Q86U70 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
LDB1Q86U70 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.74■■□□□ 1.39
LDB1Q86U70 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LDB1Q86U70 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LDB1Q86U70 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LDB1Q86U70 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LDB1Q86U70 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LDB1Q86U70 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
LDB1Q86U70 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LDB1Q86U70 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LDB1Q86U70 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
LDB1Q86U70 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LDB1Q86U70 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LDB1Q86U70 SLC6A10P-202ENST00000431994 2058 ntBASIC23.72■■□□□ 1.39
LDB1Q86U70 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LDB1Q86U70 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
LDB1Q86U70 AL592293.1-201ENST00000502889 1188 ntBASIC23.72■■□□□ 1.39
LDB1Q86U70 AC138932.3-201ENST00000567634 1902 ntBASIC23.72■■□□□ 1.39
LDB1Q86U70 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LDB1Q86U70 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
LDB1Q86U70 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LDB1Q86U70 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.71■■□□□ 1.39
LDB1Q86U70 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LDB1Q86U70 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LDB1Q86U70 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms