Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH2D1AO60880 MIR219A2-201ENST00000608502 1504 ntBASIC17.77■□□□□ 0.43
SH2D1AO60880 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SH2D1AO60880 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.77■□□□□ 0.43
SH2D1AO60880 AC133561.1-201ENST00000568600 2415 ntBASIC17.77■□□□□ 0.43
SH2D1AO60880 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
SH2D1AO60880 AL359504.2-201ENST00000605506 1601 ntBASIC17.76■□□□□ 0.43
SH2D1AO60880 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D1AO60880 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D1AO60880 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D1AO60880 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D1AO60880 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D1AO60880 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D1AO60880 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D1AO60880 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SH2D1AO60880 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SH2D1AO60880 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SH2D1AO60880 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.75■□□□□ 0.43
SH2D1AO60880 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SH2D1AO60880 AL359258.2-201ENST00000564063 1566 ntBASIC17.74■□□□□ 0.43
SH2D1AO60880 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH2D1AO60880 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SH2D1AO60880 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH2D1AO60880 AC097639.1-201ENST00000565519 1891 ntBASIC17.74■□□□□ 0.43
SH2D1AO60880 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.74■□□□□ 0.43
SH2D1AO60880 AC008813.1-201ENST00000536597 885 ntBASIC17.74■□□□□ 0.43
SH2D1AO60880 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.74■□□□□ 0.43
SH2D1AO60880 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SH2D1AO60880 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SH2D1AO60880 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.73■□□□□ 0.43
SH2D1AO60880 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SH2D1AO60880 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.73■□□□□ 0.43
SH2D1AO60880 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.73■□□□□ 0.43
SH2D1AO60880 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.73■□□□□ 0.43
SH2D1AO60880 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SH2D1AO60880 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SH2D1AO60880 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SH2D1AO60880 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SH2D1AO60880 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SH2D1AO60880 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SH2D1AO60880 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SH2D1AO60880 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SH2D1AO60880 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SH2D1AO60880 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SH2D1AO60880 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SH2D1AO60880 SLC6A10P-202ENST00000431994 2058 ntBASIC17.72■□□□□ 0.43
SH2D1AO60880 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SH2D1AO60880 AC148477.6-201ENST00000623746 465 ntBASIC17.72■□□□□ 0.43
SH2D1AO60880 LINC00543-201ENST00000567234 1845 ntBASIC17.72■□□□□ 0.43
SH2D1AO60880 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SH2D1AO60880 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SH2D1AO60880 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D1AO60880 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D1AO60880 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D1AO60880 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.71■□□□□ 0.43
SH2D1AO60880 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D1AO60880 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D1AO60880 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SH2D1AO60880 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.71■□□□□ 0.43
SH2D1AO60880 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.71■□□□□ 0.42
SH2D1AO60880 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SH2D1AO60880 AC012676.1-201ENST00000574705 1949 ntBASIC17.7■□□□□ 0.42
SH2D1AO60880 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.7■□□□□ 0.42
SH2D1AO60880 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.7■□□□□ 0.42
SH2D1AO60880 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D1AO60880 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D1AO60880 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D1AO60880 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SH2D1AO60880 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.7■□□□□ 0.42
SH2D1AO60880 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SH2D1AO60880 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SH2D1AO60880 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D1AO60880 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.69■□□□□ 0.42
SH2D1AO60880 LINC01971-201ENST00000617888 1048 ntBASIC17.69■□□□□ 0.42
SH2D1AO60880 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SH2D1AO60880 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D1AO60880 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D1AO60880 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D1AO60880 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D1AO60880 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SH2D1AO60880 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D1AO60880 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D1AO60880 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D1AO60880 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.68■□□□□ 0.42
SH2D1AO60880 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D1AO60880 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D1AO60880 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SH2D1AO60880 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.68■□□□□ 0.42
SH2D1AO60880 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.68■□□□□ 0.42
SH2D1AO60880 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SH2D1AO60880 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SH2D1AO60880 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.67■□□□□ 0.42
SH2D1AO60880 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D1AO60880 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
SH2D1AO60880 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.67■□□□□ 0.42
SH2D1AO60880 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SH2D1AO60880 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D1AO60880 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SH2D1AO60880 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.67■□□□□ 0.42
SH2D1AO60880 DUX4L13-201ENST00000554103 1267 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms