Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASQ2O14958 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASQ2O14958 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASQ2O14958 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASQ2O14958 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASQ2O14958 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASQ2O14958 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASQ2O14958 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASQ2O14958 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
CASQ2O14958 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASQ2O14958 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASQ2O14958 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.62■■□□□ 1.21
CASQ2O14958 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASQ2O14958 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASQ2O14958 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASQ2O14958 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CASQ2O14958 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CASQ2O14958 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.61■■□□□ 1.21
CASQ2O14958 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CASQ2O14958 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.21
CASQ2O14958 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CASQ2O14958 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASQ2O14958 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASQ2O14958 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CASQ2O14958 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASQ2O14958 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASQ2O14958 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASQ2O14958 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASQ2O14958 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CASQ2O14958 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.59■■□□□ 1.21
CASQ2O14958 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.59■■□□□ 1.21
CASQ2O14958 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CASQ2O14958 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.59■■□□□ 1.21
CASQ2O14958 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CASQ2O14958 LINC00273-201ENST00000539813 1452 ntBASIC22.59■■□□□ 1.21
CASQ2O14958 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CASQ2O14958 PKD1P6-201ENST00000343738 4769 ntBASIC22.58■■□□□ 1.21
CASQ2O14958 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.58■■□□□ 1.21
CASQ2O14958 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CASQ2O14958 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CASQ2O14958 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.58■■□□□ 1.21
CASQ2O14958 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASQ2O14958 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.57■■□□□ 1.2
CASQ2O14958 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CASQ2O14958 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CASQ2O14958 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASQ2O14958 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CASQ2O14958 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASQ2O14958 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CASQ2O14958 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CASQ2O14958 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CASQ2O14958 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CASQ2O14958 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
CASQ2O14958 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.56■■□□□ 1.2
CASQ2O14958 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.56■■□□□ 1.2
CASQ2O14958 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.56■■□□□ 1.2
CASQ2O14958 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC22.56■■□□□ 1.2
CASQ2O14958 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CASQ2O14958 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CASQ2O14958 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CASQ2O14958 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASQ2O14958 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CASQ2O14958 AC141586.4-201ENST00000624558 1573 ntBASIC22.55■■□□□ 1.2
CASQ2O14958 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASQ2O14958 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASQ2O14958 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.55■■□□□ 1.2
CASQ2O14958 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASQ2O14958 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASQ2O14958 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASQ2O14958 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CASQ2O14958 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CASQ2O14958 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASQ2O14958 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.54■■□□□ 1.2
CASQ2O14958 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.54■■□□□ 1.2
CASQ2O14958 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASQ2O14958 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASQ2O14958 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.54■■□□□ 1.2
CASQ2O14958 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CASQ2O14958 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CASQ2O14958 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASQ2O14958 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CASQ2O14958 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CASQ2O14958 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CASQ2O14958 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASQ2O14958 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CASQ2O14958 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CASQ2O14958 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CASQ2O14958 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CASQ2O14958 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.52■■□□□ 1.2
CASQ2O14958 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CASQ2O14958 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CASQ2O14958 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.51■■□□□ 1.19
CASQ2O14958 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CASQ2O14958 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CASQ2O14958 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CASQ2O14958 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CASQ2O14958 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CASQ2O14958 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CASQ2O14958 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.5■■□□□ 1.19
CASQ2O14958 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms