Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.264e-6■□□□□ 8.2
DROSHAQ9NRR4 PCED1A-204ENST00000448755 1170 ntTSL 328.94■■■□□ 2.224e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-209ENST00000604434 2103 nt28.81■■■□□ 2.24e-6■□□□□ 8.2
DROSHAQ9NRR4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.193e-8■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC28.62■■■□□ 2.172e-11■□□□□ 8.2
DROSHAQ9NRR4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC28.52■■■□□ 2.162e-9■□□□□ 8.2
DROSHAQ9NRR4 PILRB-206ENST00000443526 1364 ntTSL 1 (best)28.5■■■□□ 2.154e-6■□□□□ 8.2
DROSHAQ9NRR4 ABHD5-201ENST00000013894 833 ntTSL 328.37■■■□□ 2.134e-6■□□□□ 8.2
DROSHAQ9NRR4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC28.35■■■□□ 2.134e-6■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-212ENST00000589791 1329 ntTSL 228.27■■■□□ 2.123e-8■□□□□ 8.2
DROSHAQ9NRR4 PIEZO1-206ENST00000474606 544 ntTSL 428.1■■■□□ 2.094e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-208ENST00000590925 648 ntTSL 1 (best)28.09■■■□□ 2.092e-11■□□□□ 8.2
DROSHAQ9NRR4 PILRB-202ENST00000422808 1599 ntTSL 1 (best)27.98■■■□□ 2.074e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.052e-10■□□□□ 8.2
DROSHAQ9NRR4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC27.76■■■□□ 2.044e-6■□□□□ 8.2
DROSHAQ9NRR4 STX4-208ENST00000478150 545 ntTSL 427.45■■□□□ 1.983e-8■□□□□ 8.2
DROSHAQ9NRR4 RPL27-208ENST00000593262 1872 ntTSL 227.4■■□□□ 1.982e-10■□□□□ 8.2
DROSHAQ9NRR4 PIEZO1-215ENST00000566414 564 ntTSL 427.34■■□□□ 1.974e-6■□□□□ 8.2
DROSHAQ9NRR4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.962e-10■□□□□ 8.2
DROSHAQ9NRR4 STRN4-222ENST00000601869 2240 nt27.29■■□□□ 1.964e-6■□□□□ 8.2
DROSHAQ9NRR4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC27.08■■□□□ 1.932e-9■□□□□ 8.2
DROSHAQ9NRR4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.913e-7■□□□□ 8.2
DROSHAQ9NRR4 PILRB-201ENST00000419749 1506 ntTSL 1 (best)27.01■■□□□ 1.914e-6■□□□□ 8.2
DROSHAQ9NRR4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC26.95■■□□□ 1.94e-6■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-215ENST00000487475 910 ntTSL 226.86■■□□□ 1.892e-9■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-218ENST00000550856 1003 ntTSL 226.71■■□□□ 1.872e-10■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-219ENST00000492191 581 ntTSL 226.36■■□□□ 1.812e-9■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-208ENST00000588450 2858 ntTSL 226.24■■□□□ 1.793e-8■□□□□ 8.2
DROSHAQ9NRR4 TAF15-203ENST00000603393 1214 ntTSL 1 (best)26.21■■□□□ 1.794e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-204ENST00000603427 547 ntTSL 426.21■■□□□ 1.794e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-208ENST00000604360 409 ntTSL 326.21■■□□□ 1.794e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-214ENST00000605649 776 ntTSL 526.21■■□□□ 1.794e-6■□□□□ 8.2
DROSHAQ9NRR4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.763e-7■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-202ENST00000414148 360 ntTSL 526■■□□□ 1.753e-8■□□□□ 8.2
DROSHAQ9NRR4 PILRB-210ENST00000457519 2074 ntTSL 1 (best)25.83■■□□□ 1.734e-6■□□□□ 8.2
DROSHAQ9NRR4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC25.79■■□□□ 1.724e-6■□□□□ 8.2
DROSHAQ9NRR4 RPL23A-208ENST00000580755 412 ntTSL 225.74■■□□□ 1.714e-6■□□□□ 8.2
DROSHAQ9NRR4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.73e-8■□□□□ 8.2
DROSHAQ9NRR4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC25.25■■□□□ 1.634e-6■□□□□ 8.2
DROSHAQ9NRR4 TCF3-215ENST00000590684 1313 ntTSL 325.04■■□□□ 1.64e-6■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.63e-8■□□□□ 8.2
DROSHAQ9NRR4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.583e-8■□□□□ 8.2
DROSHAQ9NRR4 PCED1A-203ENST00000439542 1187 ntTSL 224.81■■□□□ 1.564e-6■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC24.59■■□□□ 1.531e-15■□□□□ 8.2
DROSHAQ9NRR4 TCF3-214ENST00000590605 541 ntTSL 224.13■■□□□ 1.454e-6■□□□□ 8.2
DROSHAQ9NRR4 NFE2-205ENST00000553198 1208 ntTSL 524.11■■□□□ 1.453e-8■□□□□ 8.2
DROSHAQ9NRR4 TCF3-217ENST00000592628 1751 ntTSL 523.73■■□□□ 1.394e-6■□□□□ 8.2
DROSHAQ9NRR4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.373e-8■□□□□ 8.2
DROSHAQ9NRR4 LINC01029-203ENST00000582805 788 ntTSL 1 (best)23.02■■□□□ 1.282e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-226ENST00000552461 2591 ntTSL 222.88■■□□□ 1.252e-10■□□□□ 8.2
DROSHAQ9NRR4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.154e-6■□□□□ 8.2
DROSHAQ9NRR4 UBE2I-209ENST00000562470 433 ntTSL 222.14■■□□□ 1.143e-7■□□□□ 8.2
DROSHAQ9NRR4 PILRB-209ENST00000455145 902 ntTSL 522.1■■□□□ 1.134e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-206ENST00000546990 770 ntTSL 321.89■■□□□ 1.12e-10■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC21.86■■□□□ 1.092e-11■□□□□ 8.2
DROSHAQ9NRR4 TCF3-218ENST00000593064 2694 ntTSL 221.85■■□□□ 1.094e-6■□□□□ 8.2
DROSHAQ9NRR4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC21.68■■□□□ 1.062e-10■□□□□ 8.2
DROSHAQ9NRR4 FBXL18-202ENST00000415009 2526 ntTSL 221.66■■□□□ 1.064e-6■□□□□ 8.2
DROSHAQ9NRR4 PILRB-203ENST00000431140 772 ntTSL 321.48■■□□□ 1.034e-6■□□□□ 8.2
DROSHAQ9NRR4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.973e-8■□□□□ 8.2
DROSHAQ9NRR4 ABHD5-204ENST00000456453 876 ntTSL 421.09■□□□□ 0.974e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-205ENST00000587746 492 ntTSL 1 (best)21.07■□□□□ 0.962e-11■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.952e-9■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-204ENST00000586192 524 ntTSL 1 (best)20.96■□□□□ 0.952e-11■□□□□ 8.2
DROSHAQ9NRR4 TCF3-209ENST00000586410 288 ntTSL 520.77■□□□□ 0.924e-6■□□□□ 8.2
DROSHAQ9NRR4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.892e-12■□□□□ 8.2
DROSHAQ9NRR4 TAF15-212ENST00000604879 808 ntTSL 520.25■□□□□ 0.834e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-213ENST00000605197 760 ntTSL 220.25■□□□□ 0.834e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC19.96■□□□□ 0.792e-11■□□□□ 8.2
DROSHAQ9NRR4 ZNHIT1-203ENST00000485387 2898 ntTSL 1 (best)19.9■□□□□ 0.783e-7■□□□□ 8.2
DROSHAQ9NRR4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.722e-9■□□□□ 8.2
DROSHAQ9NRR4 CBL-205ENST00000637974 3030 ntAPPRIS ALT2 TSL 519.44■□□□□ 0.74e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-204ENST00000546564 844 ntTSL 219.42■□□□□ 0.72e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-216ENST00000550296 562 ntTSL 219.42■□□□□ 0.72e-10■□□□□ 8.2
DROSHAQ9NRR4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.684e-6■□□□□ 8.2
DROSHAQ9NRR4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC19.21■□□□□ 0.673e-7■□□□□ 8.2
DROSHAQ9NRR4 ATP11A-206ENST00000419631 2446 ntTSL 319.15■□□□□ 0.661e-16■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC18.87■□□□□ 0.612e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-209ENST00000547211 781 ntTSL 318.87■□□□□ 0.612e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-215ENST00000549242 518 ntTSL 218.87■□□□□ 0.612e-10■□□□□ 8.2
DROSHAQ9NRR4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.83■□□□□ 0.64e-6■□□□□ 8.2
DROSHAQ9NRR4 TMC6-215ENST00000590494 702 ntTSL 218.51■□□□□ 0.554e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.542e-11■□□□□ 8.2
DROSHAQ9NRR4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.544e-6■□□□□ 8.2
DROSHAQ9NRR4 FBXL18-204ENST00000458142 2686 ntTSL 218.11■□□□□ 0.494e-6■□□□□ 8.2
DROSHAQ9NRR4 PILRB-211ENST00000493091 4345 ntTSL 217.99■□□□□ 0.474e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-209ENST00000591800 496 ntTSL 1 (best)17.98■□□□□ 0.472e-11■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC17.91■□□□□ 0.462e-11■□□□□ 8.2
DROSHAQ9NRR4 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.434e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-203ENST00000392514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.382e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-217ENST00000550423 561 ntTSL 317.45■□□□□ 0.382e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-214ENST00000549098 1106 ntTSL 217.16■□□□□ 0.342e-10■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-212ENST00000583307 886 ntTSL 216.8■□□□□ 0.281e-15■□□□□ 8.2
DROSHAQ9NRR4 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC16.5■□□□□ 0.234e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC16.46■□□□□ 0.232e-10■□□□□ 8.2
DROSHAQ9NRR4 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.24e-6■□□□□ 8.2
DROSHAQ9NRR4 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.173e-8■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-224ENST00000551914 402 ntTSL 316.11■□□□□ 0.172e-10■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-204ENST00000577513 731 ntTSL 315.85■□□□□ 0.131e-15■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-212ENST00000548551 543 ntTSL 215.8■□□□□ 0.122e-10■□□□□ 8.2
Retrieved 100 of 16,331 protein–RNA pairs in 40 ms