RNA–Protein interactions for RNA: ENST00000590684.5

TCF3-215, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-215ENST00000590684 NISCHQ9Y2I1 1504 aa40.23■■■■■ 4.03
TCF3-215ENST00000590684 CCDC180Q9P1Z9 1646 aa35.95■■■■□ 3.35
TCF3-215ENST00000590684 ABCC9O60706 1549 aa35.62■■■■□ 3.29
TCF3-215ENST00000590684 RB1CC1Q8TDY2 1594 aa34.04■■■■□ 3.04
TCF3-215ENST00000590684 NACADO15069 1562 aa33.89■■■■□ 3.02
TCF3-215ENST00000590684 DCAF8L2P0C7V8 631 aa33.71■■■□□ 2.99
TCF3-215ENST00000590684 MYO15BQ96JP2 1530 aa33.56■■■□□ 2.96
TCF3-215ENST00000590684 ZCCHC6Q5VYS8 1495 aaKnown RBP33.44■■■□□ 2.94
TCF3-215ENST00000590684 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
TCF3-215ENST00000590684 DCAF1Q9Y4B6 1507 aa33.25■■■□□ 2.91
TCF3-215ENST00000590684 PABPN1Q86U42 306 aaKnown RBP eCLIP33.19■■■□□ 2.93e-7■□□□□ 8.9
TCF3-215ENST00000590684 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
TCF3-215ENST00000590684 BICRAQ9NZM4 1560 aa33.09■■■□□ 2.89
TCF3-215ENST00000590684 SCRIBQ14160 1630 aa32.79■■■□□ 2.84
TCF3-215ENST00000590684 SHROOM4Q9ULL8 1493 aa32.65■■■□□ 2.82
TCF3-215ENST00000590684 EIF4G1Q04637 1599 aaKnown RBP32.23■■■□□ 2.75
TCF3-215ENST00000590684 CC2D2AQ9P2K1 1620 aa32.21■■■□□ 2.75
TCF3-215ENST00000590684 CECR2Q9BXF3 1484 aa32.04■■■□□ 2.72
TCF3-215ENST00000590684 SMARCA4P51532 1647 aa31.32■■■□□ 2.6
TCF3-215ENST00000590684 NCAPD3P42695 1498 aa31.29■■■□□ 2.6
TCF3-215ENST00000590684 ATAD2BQ9ULI0 1458 aa31.25■■■□□ 2.59
TCF3-215ENST00000590684 BAZ1AQ9NRL2 1556 aaPredicted RBP31.2■■■□□ 2.58
TCF3-215ENST00000590684 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
TCF3-215ENST00000590684 HMGXB3Q12766 1538 aa31.11■■■□□ 2.57
TCF3-215ENST00000590684 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
TCF3-215ENST00000590684 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.55
TCF3-215ENST00000590684 BAZ1BQ9UIG0 1483 aaKnown RBP30.96■■■□□ 2.55
TCF3-215ENST00000590684 NESP48681 1621 aa30.71■■■□□ 2.51
TCF3-215ENST00000590684 ERCC6Q03468 1493 aa30.7■■■□□ 2.51
TCF3-215ENST00000590684 WIZO95785 1651 aa30.65■■■□□ 2.5
TCF3-215ENST00000590684 CUX2O14529 1486 aa30.56■■■□□ 2.48
TCF3-215ENST00000590684 LAMC3Q9Y6N6 1575 aa30.54■■■□□ 2.48
TCF3-215ENST00000590684 RSF1Q96T23 1441 aaPredicted RBP30.48■■■□□ 2.47
TCF3-215ENST00000590684 THOC2Q8NI27 1593 aaKnown RBP30.36■■■□□ 2.45
TCF3-215ENST00000590684 CADPSQ9ULU8 1353 aa30.35■■■□□ 2.45
TCF3-215ENST00000590684 KIF21AQ7Z4S6 1674 aa30.32■■■□□ 2.44
TCF3-215ENST00000590684 PDS5BQ9NTI5 1447 aa30.31■■■□□ 2.44
TCF3-215ENST00000590684 TOP2AP11388 1531 aaKnown RBP30.29■■■□□ 2.44
TCF3-215ENST00000590684 DNAJC5Q9H3Z4 198 aa30.12■■■□□ 2.41
TCF3-215ENST00000590684 CFTRP13569 1480 aa30.09■■■□□ 2.41
TCF3-215ENST00000590684 MRC2Q9UBG0 1479 aa30.07■■■□□ 2.4
TCF3-215ENST00000590684 FANCD2Q9BXW9 1451 aa30.01■■■□□ 2.39
TCF3-215ENST00000590684 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.39
TCF3-215ENST00000590684 WDR62O43379 1518 aa30.01■■■□□ 2.39
TCF3-215ENST00000590684 CCDC88BA6NC98 1476 aa29.93■■■□□ 2.38
TCF3-215ENST00000590684 PRDM2Q13029 1718 aa29.82■■■□□ 2.36
TCF3-215ENST00000590684 URB2Q14146 1524 aaKnown RBP29.77■■■□□ 2.36
TCF3-215ENST00000590684 TOPBP1Q92547 1522 aa29.49■■■□□ 2.31
TCF3-215ENST00000590684 DNMBPQ6XZF7 1577 aa29.41■■■□□ 2.3
TCF3-215ENST00000590684 ABCC8Q09428 1581 aa29.41■■■□□ 2.3
TCF3-215ENST00000590684 IFT140Q96RY7 1462 aa29.4■■■□□ 2.3
TCF3-215ENST00000590684 ZNF608Q9ULD9 1512 aaPredicted RBP29.34■■■□□ 2.29
TCF3-215ENST00000590684 SUPT5HO00267 1087 aaKnown RBP29.31■■■□□ 2.28
TCF3-215ENST00000590684 POLA1P09884 1462 aaPredicted RBP29.22■■■□□ 2.27
TCF3-215ENST00000590684 TARBP1Q13395 1621 aaKnown RBP29.22■■■□□ 2.27
TCF3-215ENST00000590684 EIF4G3O43432 1585 aaKnown RBP29.21■■■□□ 2.27
TCF3-215ENST00000590684 OSCARQ8IYS5 282 aa29.17■■■□□ 2.26
TCF3-215ENST00000590684 CUX1P39880 1505 aa29.12■■■□□ 2.25
TCF3-215ENST00000590684 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.257e-7■■■□□ 18.9
TCF3-215ENST00000590684 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
TCF3-215ENST00000590684 FGD5Q6ZNL6 1462 aa29.08■■■□□ 2.25
TCF3-215ENST00000590684 SOGA1O94964 1423 aa29.05■■■□□ 2.24
TCF3-215ENST00000590684 TDRD9Q8NDG6 1382 aaKnown RBP28.95■■■□□ 2.23
TCF3-215ENST00000590684 TRIM41Q8WV44 630 aa28.93■■■□□ 2.22
TCF3-215ENST00000590684 WDR97A6NE52 1622 aa28.92■■■□□ 2.22
TCF3-215ENST00000590684 CHD1O14646 1710 aa28.91■■■□□ 2.22
TCF3-215ENST00000590684 SNAPC4Q5SXM2 1469 aa28.83■■■□□ 2.21
TCF3-215ENST00000590684 RIMBP3CA6NJZ7 1639 aa28.82■■■□□ 2.2
TCF3-215ENST00000590684 RIMBP3BA6NNM3 1639 aa28.82■■■□□ 2.2
TCF3-215ENST00000590684 RIMBP3Q9UFD9 1639 aa28.82■■■□□ 2.2
TCF3-215ENST00000590684 FBLN2P98095 1184 aa28.77■■■□□ 2.2
TCF3-215ENST00000590684 GRIN2BQ13224 1484 aa28.77■■■□□ 2.2
TCF3-215ENST00000590684 ARHGEF11O15085 1522 aa28.76■■■□□ 2.19
TCF3-215ENST00000590684 ABCA10Q8WWZ4 1543 aa28.76■■■□□ 2.19
TCF3-215ENST00000590684 MAGI1Q96QZ7 1491 aaPredicted RBP28.75■■■□□ 2.19
TCF3-215ENST00000590684 BIVM-ERCC5R4GMW8 1640 aa28.74■■■□□ 2.19
TCF3-215ENST00000590684 TOP2BQ02880 1626 aa28.74■■■□□ 2.19
TCF3-215ENST00000590684 WRNQ14191 1432 aaPredicted RBP eCLIP28.73■■■□□ 2.19
TCF3-215ENST00000590684 SYNJ1O43426 1573 aa28.73■■■□□ 2.19
TCF3-215ENST00000590684 GAPVD1Q14C86 1478 aa28.72■■■□□ 2.19
TCF3-215ENST00000590684 ABCA5Q8WWZ7 1642 aa28.71■■■□□ 2.19
TCF3-215ENST00000590684 PBRM1Q86U86 1689 aa28.71■■■□□ 2.19
TCF3-215ENST00000590684 SYNJ2O15056 1496 aa28.65■■■□□ 2.18
TCF3-215ENST00000590684 CHMP7Q8WUX9 453 aaPredicted RBP28.63■■■□□ 2.17
TCF3-215ENST00000590684 CLASP1Q7Z460 1538 aa28.61■■■□□ 2.17
TCF3-215ENST00000590684 ARAP1Q96P48 1450 aa28.51■■■□□ 2.16
TCF3-215ENST00000590684 ADAMTS12P58397 1594 aa28.48■■■□□ 2.15
TCF3-215ENST00000590684 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
TCF3-215ENST00000590684 GRIN2AQ12879 1464 aa28.43■■■□□ 2.14
TCF3-215ENST00000590684 ERICH3Q5RHP9 1530 aa28.41■■■□□ 2.14
TCF3-215ENST00000590684 FHAD1B1AJZ9 1412 aa28.37■■■□□ 2.13
TCF3-215ENST00000590684 NUP160Q12769 1436 aa28.33■■■□□ 2.13
TCF3-215ENST00000590684 CEP170Q5SW79 1584 aa28.32■■■□□ 2.12
TCF3-215ENST00000590684 ERCC6L2Q5T890 1561 aa28.19■■■□□ 2.1
TCF3-215ENST00000590684 SHROOM2Q13796 1616 aa28.17■■■□□ 2.1
TCF3-215ENST00000590684 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
TCF3-215ENST00000590684 IGF1RP08069 1367 aa28.11■■■□□ 2.09
TCF3-215ENST00000590684 RUSC2Q8N2Y8 1516 aa28.08■■■□□ 2.09
TCF3-215ENST00000590684 CUL7Q14999 1698 aa28.06■■■□□ 2.08
TCF3-215ENST00000590684 TRHP20396 242 aaPredicted RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms