Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 KRT18P24-201ENST00000344739 1156 ntBASIC23.19■■□□□ 1.3
CNTNAP3BQ96NU0 RPS2P7-201ENST00000447334 885 ntBASIC23.19■■□□□ 1.3
CNTNAP3BQ96NU0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.19■■□□□ 1.3
CNTNAP3BQ96NU0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP3BQ96NU0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP3BQ96NU0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CNTNAP3BQ96NU0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP3BQ96NU0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP3BQ96NU0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP3BQ96NU0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP3BQ96NU0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CNTNAP3BQ96NU0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.17■■□□□ 1.3
CNTNAP3BQ96NU0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CNTNAP3BQ96NU0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CNTNAP3BQ96NU0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CNTNAP3BQ96NU0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CNTNAP3BQ96NU0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.17■■□□□ 1.3
CNTNAP3BQ96NU0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CNTNAP3BQ96NU0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.16■■□□□ 1.3
CNTNAP3BQ96NU0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CNTNAP3BQ96NU0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.16■■□□□ 1.3
CNTNAP3BQ96NU0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CNTNAP3BQ96NU0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CNTNAP3BQ96NU0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.15■■□□□ 1.3
CNTNAP3BQ96NU0 UNC93B3-201ENST00000308076 687 ntBASIC23.15■■□□□ 1.3
CNTNAP3BQ96NU0 ID1-201ENST00000376105 1233 ntBASIC23.15■■□□□ 1.3
CNTNAP3BQ96NU0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.15■■□□□ 1.3
CNTNAP3BQ96NU0 AC022616.5-201ENST00000518796 181 ntBASIC23.15■■□□□ 1.3
CNTNAP3BQ96NU0 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.15■■□□□ 1.3
CNTNAP3BQ96NU0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CNTNAP3BQ96NU0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CNTNAP3BQ96NU0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CNTNAP3BQ96NU0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CNTNAP3BQ96NU0 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.14■■□□□ 1.29
CNTNAP3BQ96NU0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CNTNAP3BQ96NU0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CNTNAP3BQ96NU0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNTNAP3BQ96NU0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNTNAP3BQ96NU0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CNTNAP3BQ96NU0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.13■■□□□ 1.29
CNTNAP3BQ96NU0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CNTNAP3BQ96NU0 AL136162.1-201ENST00000607711 1078 ntBASIC23.13■■□□□ 1.29
CNTNAP3BQ96NU0 IKBKGP1-201ENST00000612193 1073 ntBASIC23.13■■□□□ 1.29
CNTNAP3BQ96NU0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.13■■□□□ 1.29
CNTNAP3BQ96NU0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CNTNAP3BQ96NU0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.12■■□□□ 1.29
CNTNAP3BQ96NU0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CNTNAP3BQ96NU0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.12■■□□□ 1.29
CNTNAP3BQ96NU0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP3BQ96NU0 MTDHP2-201ENST00000601468 714 ntBASIC23.12■■□□□ 1.29
CNTNAP3BQ96NU0 AL355001.2-201ENST00000620617 1191 ntBASIC23.12■■□□□ 1.29
CNTNAP3BQ96NU0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP3BQ96NU0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP3BQ96NU0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP3BQ96NU0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP3BQ96NU0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP3BQ96NU0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP3BQ96NU0 EDA-201ENST00000338901 1233 ntBASIC23.1■■□□□ 1.29
CNTNAP3BQ96NU0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP3BQ96NU0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CNTNAP3BQ96NU0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP3BQ96NU0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP3BQ96NU0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP3BQ96NU0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CNTNAP3BQ96NU0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNTNAP3BQ96NU0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CNTNAP3BQ96NU0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNTNAP3BQ96NU0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CNTNAP3BQ96NU0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.08■■□□□ 1.29
CNTNAP3BQ96NU0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.08■■□□□ 1.29
CNTNAP3BQ96NU0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CNTNAP3BQ96NU0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CNTNAP3BQ96NU0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CNTNAP3BQ96NU0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CNTNAP3BQ96NU0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CNTNAP3BQ96NU0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CNTNAP3BQ96NU0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CNTNAP3BQ96NU0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CNTNAP3BQ96NU0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.07■■□□□ 1.28
CNTNAP3BQ96NU0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CNTNAP3BQ96NU0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.07■■□□□ 1.28
CNTNAP3BQ96NU0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CNTNAP3BQ96NU0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CNTNAP3BQ96NU0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.06■■□□□ 1.28
CNTNAP3BQ96NU0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.06■■□□□ 1.28
CNTNAP3BQ96NU0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
CNTNAP3BQ96NU0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
CNTNAP3BQ96NU0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CNTNAP3BQ96NU0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.05■■□□□ 1.28
CNTNAP3BQ96NU0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.04■■□□□ 1.28
CNTNAP3BQ96NU0 AL137784.2-201ENST00000607332 1000 ntBASIC23.04■■□□□ 1.28
CNTNAP3BQ96NU0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CNTNAP3BQ96NU0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CNTNAP3BQ96NU0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CNTNAP3BQ96NU0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.04■■□□□ 1.28
CNTNAP3BQ96NU0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNTNAP3BQ96NU0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.03■■□□□ 1.28
CNTNAP3BQ96NU0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNTNAP3BQ96NU0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CNTNAP3BQ96NU0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 425.8 ms