Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKX6-1P78426 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NKX6-1P78426 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NKX6-1P78426 AC018755.3-202ENST00000596210 929 ntBASIC21.03■□□□□ 0.96
NKX6-1P78426 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NKX6-1P78426 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NKX6-1P78426 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.03■□□□□ 0.96
NKX6-1P78426 AP004609.3-201ENST00000610705 1884 ntBASIC21.03■□□□□ 0.96
NKX6-1P78426 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX6-1P78426 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NKX6-1P78426 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
NKX6-1P78426 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.02■□□□□ 0.96
NKX6-1P78426 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX6-1P78426 AC103834.1-201ENST00000520383 144 ntBASIC21.02■□□□□ 0.96
NKX6-1P78426 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.02■□□□□ 0.96
NKX6-1P78426 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX6-1P78426 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX6-1P78426 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NKX6-1P78426 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NKX6-1P78426 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.01■□□□□ 0.95
NKX6-1P78426 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.01■□□□□ 0.95
NKX6-1P78426 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
NKX6-1P78426 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NKX6-1P78426 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NKX6-1P78426 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NKX6-1P78426 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NKX6-1P78426 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NKX6-1P78426 GUSBP5-201ENST00000418136 578 ntBASIC21■□□□□ 0.95
NKX6-1P78426 OR2A1-AS1-204ENST00000470435 602 ntBASIC21■□□□□ 0.95
NKX6-1P78426 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21■□□□□ 0.95
NKX6-1P78426 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NKX6-1P78426 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKX6-1P78426 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKX6-1P78426 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NKX6-1P78426 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NKX6-1P78426 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NKX6-1P78426 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NKX6-1P78426 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NKX6-1P78426 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
NKX6-1P78426 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.97■□□□□ 0.95
NKX6-1P78426 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NKX6-1P78426 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NKX6-1P78426 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.97■□□□□ 0.95
NKX6-1P78426 PVT1_1.1-201ENST00000615125 194 ntBASIC20.97■□□□□ 0.95
NKX6-1P78426 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NKX6-1P78426 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.97■□□□□ 0.95
NKX6-1P78426 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NKX6-1P78426 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NKX6-1P78426 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NKX6-1P78426 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NKX6-1P78426 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NKX6-1P78426 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NKX6-1P78426 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NKX6-1P78426 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.95■□□□□ 0.94
NKX6-1P78426 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NKX6-1P78426 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NKX6-1P78426 MIR4508-201ENST00000584178 70 ntBASIC20.95■□□□□ 0.94
NKX6-1P78426 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.95■□□□□ 0.94
NKX6-1P78426 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.95■□□□□ 0.94
NKX6-1P78426 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NKX6-1P78426 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NKX6-1P78426 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.94■□□□□ 0.94
NKX6-1P78426 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NKX6-1P78426 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.94■□□□□ 0.94
NKX6-1P78426 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NKX6-1P78426 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NKX6-1P78426 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NKX6-1P78426 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.94■□□□□ 0.94
NKX6-1P78426 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
NKX6-1P78426 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
NKX6-1P78426 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NKX6-1P78426 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.93■□□□□ 0.94
NKX6-1P78426 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NKX6-1P78426 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.93■□□□□ 0.94
NKX6-1P78426 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NKX6-1P78426 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NKX6-1P78426 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NKX6-1P78426 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NKX6-1P78426 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NKX6-1P78426 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.92■□□□□ 0.94
NKX6-1P78426 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NKX6-1P78426 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.91■□□□□ 0.94
NKX6-1P78426 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.91■□□□□ 0.94
NKX6-1P78426 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NKX6-1P78426 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.91■□□□□ 0.94
NKX6-1P78426 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.91■□□□□ 0.94
NKX6-1P78426 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NKX6-1P78426 AL031848.2-201ENST00000607670 837 ntBASIC20.91■□□□□ 0.94
NKX6-1P78426 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NKX6-1P78426 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms