Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
COL15A1P39059 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.96■■■□□ 2.55
COL15A1P39059 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL15A1P39059 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.96■■■□□ 2.55
COL15A1P39059 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.95■■■□□ 2.55
COL15A1P39059 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.95■■■□□ 2.55
COL15A1P39059 AL449106.1-201ENST00000608517 1980 ntBASIC30.95■■■□□ 2.54
COL15A1P39059 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.94■■■□□ 2.54
COL15A1P39059 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL15A1P39059 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
COL15A1P39059 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
COL15A1P39059 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
COL15A1P39059 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.93■■■□□ 2.54
COL15A1P39059 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.93■■■□□ 2.54
COL15A1P39059 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.93■■■□□ 2.54
COL15A1P39059 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
COL15A1P39059 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
COL15A1P39059 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
COL15A1P39059 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.92■■■□□ 2.54
COL15A1P39059 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
COL15A1P39059 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
COL15A1P39059 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
COL15A1P39059 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
COL15A1P39059 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
COL15A1P39059 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.91■■■□□ 2.54
COL15A1P39059 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
COL15A1P39059 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.9■■■□□ 2.54
COL15A1P39059 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
COL15A1P39059 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.9■■■□□ 2.54
COL15A1P39059 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL15A1P39059 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL15A1P39059 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.89■■■□□ 2.54
COL15A1P39059 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
COL15A1P39059 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.53
COL15A1P39059 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL15A1P39059 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL15A1P39059 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL15A1P39059 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL15A1P39059 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC30.88■■■□□ 2.53
COL15A1P39059 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL15A1P39059 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL15A1P39059 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL15A1P39059 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL15A1P39059 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL15A1P39059 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
COL15A1P39059 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.86■■■□□ 2.53
COL15A1P39059 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
COL15A1P39059 AC022616.5-201ENST00000518796 181 ntBASIC30.86■■■□□ 2.53
COL15A1P39059 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL15A1P39059 BX664725.1-201ENST00000438252 379 ntBASIC30.85■■■□□ 2.53
COL15A1P39059 KRT125P-201ENST00000546827 989 ntBASIC30.85■■■□□ 2.53
COL15A1P39059 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.85■■■□□ 2.53
COL15A1P39059 MIR4787-201ENST00000607364 84 ntBASIC30.85■■■□□ 2.53
COL15A1P39059 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL15A1P39059 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL15A1P39059 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.84■■■□□ 2.53
COL15A1P39059 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL15A1P39059 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
COL15A1P39059 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.83■■■□□ 2.53
COL15A1P39059 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL15A1P39059 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
COL15A1P39059 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
COL15A1P39059 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.82■■■□□ 2.52
COL15A1P39059 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.82■■■□□ 2.52
COL15A1P39059 UNC93B8-201ENST00000511903 705 ntBASIC30.82■■■□□ 2.52
COL15A1P39059 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
COL15A1P39059 KRT18P10-201ENST00000388836 1287 ntBASIC30.81■■■□□ 2.52
COL15A1P39059 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
COL15A1P39059 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
COL15A1P39059 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
COL15A1P39059 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.81■■■□□ 2.52
COL15A1P39059 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.8■■■□□ 2.52
COL15A1P39059 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
COL15A1P39059 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
COL15A1P39059 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.8■■■□□ 2.52
COL15A1P39059 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.8■■■□□ 2.52
COL15A1P39059 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
COL15A1P39059 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
COL15A1P39059 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.79■■■□□ 2.52
COL15A1P39059 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.79■■■□□ 2.52
COL15A1P39059 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.79■■■□□ 2.52
COL15A1P39059 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
COL15A1P39059 AC008406.3-201ENST00000620001 1374 ntBASIC30.79■■■□□ 2.52
COL15A1P39059 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.79■■■□□ 2.52
COL15A1P39059 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
COL15A1P39059 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.79■■■□□ 2.52
COL15A1P39059 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.78■■■□□ 2.52
COL15A1P39059 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
COL15A1P39059 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
COL15A1P39059 KRT18P24-201ENST00000344739 1156 ntBASIC30.77■■■□□ 2.52
COL15A1P39059 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
COL15A1P39059 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.76■■■□□ 2.52
COL15A1P39059 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
COL15A1P39059 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
COL15A1P39059 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.76■■■□□ 2.51
COL15A1P39059 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
COL15A1P39059 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
COL15A1P39059 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.75■■■□□ 2.51
COL15A1P39059 KRT16P3-201ENST00000439127 1283 ntBASIC30.75■■■□□ 2.51
COL15A1P39059 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.75■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms