Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATF4P18848 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF4P18848 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF4P18848 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATF4P18848 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.79■□□□□ 0.76
ATF4P18848 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF4P18848 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATF4P18848 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATF4P18848 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF4P18848 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATF4P18848 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.79■□□□□ 0.76
ATF4P18848 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.78■□□□□ 0.76
ATF4P18848 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.78■□□□□ 0.76
ATF4P18848 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.78■□□□□ 0.76
ATF4P18848 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATF4P18848 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.78■□□□□ 0.76
ATF4P18848 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF4P18848 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF4P18848 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF4P18848 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATF4P18848 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ATF4P18848 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATF4P18848 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF4P18848 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF4P18848 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF4P18848 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF4P18848 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF4P18848 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF4P18848 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF4P18848 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.76■□□□□ 0.75
ATF4P18848 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
ATF4P18848 AL162393.1-201ENST00000437852 946 ntBASIC19.76■□□□□ 0.75
ATF4P18848 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATF4P18848 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ATF4P18848 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATF4P18848 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.75■□□□□ 0.75
ATF4P18848 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATF4P18848 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATF4P18848 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATF4P18848 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ATF4P18848 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATF4P18848 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATF4P18848 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.75■□□□□ 0.75
ATF4P18848 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.75■□□□□ 0.75
ATF4P18848 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATF4P18848 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.74■□□□□ 0.75
ATF4P18848 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.74■□□□□ 0.75
ATF4P18848 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATF4P18848 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATF4P18848 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATF4P18848 MIR3665-201ENST00000578708 105 ntBASIC19.74■□□□□ 0.75
ATF4P18848 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATF4P18848 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.74■□□□□ 0.75
ATF4P18848 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF4P18848 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATF4P18848 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF4P18848 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATF4P18848 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATF4P18848 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.73■□□□□ 0.75
ATF4P18848 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.72■□□□□ 0.75
ATF4P18848 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF4P18848 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATF4P18848 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.72■□□□□ 0.75
ATF4P18848 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF4P18848 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF4P18848 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ATF4P18848 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ATF4P18848 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.71■□□□□ 0.75
ATF4P18848 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF4P18848 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATF4P18848 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATF4P18848 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF4P18848 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF4P18848 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF4P18848 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF4P18848 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.7■□□□□ 0.74
ATF4P18848 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATF4P18848 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.69■□□□□ 0.74
ATF4P18848 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF4P18848 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF4P18848 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF4P18848 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF4P18848 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATF4P18848 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF4P18848 ABCB10P4-201ENST00000566803 2184 ntBASIC19.69■□□□□ 0.74
ATF4P18848 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF4P18848 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF4P18848 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.69■□□□□ 0.74
ATF4P18848 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATF4P18848 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.69■□□□□ 0.74
ATF4P18848 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATF4P18848 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ATF4P18848 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF4P18848 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF4P18848 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF4P18848 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF4P18848 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF4P18848 AP004833.2-201ENST00000532228 1454 ntBASIC19.68■□□□□ 0.74
ATF4P18848 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATF4P18848 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms