Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYNJ2BP-COX16A0A087WUM0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.14■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.13■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.13■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.13■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 SPCS2P3-201ENST00000500401 656 ntBASIC25.12■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.11■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.11■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 AC129492.7-201ENST00000622992 756 ntBASIC25.11■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.11■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 DUX4L9-201ENST00000449051 1259 ntBASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.1■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.09■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.08■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 DUX4L18-201ENST00000553347 1267 ntBASIC25.08■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 AC145676.1-201ENST00000514988 2004 ntBASIC25.08■■□□□ 1.61
SYNJ2BP-COX16A0A087WUM0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.08■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 AC010501.1-201ENST00000606270 1962 ntBASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.06■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.05■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 AC018755.3-202ENST00000596210 929 ntBASIC25.05■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 AC096887.2-201ENST00000623443 1957 ntBASIC25.05■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.04■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 AC004987.1-201ENST00000428627 508 ntBASIC25.04■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.04■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 AC012354.3-201ENST00000623734 483 ntBASIC25.04■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 DUSP8P4-201ENST00000399538 1761 ntBASIC25.03■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.03■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 AL033527.3-201ENST00000566366 1196 ntBASIC25.02■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SYNJ2BP-COX16A0A087WUM0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.01■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 ATP5G2P3-201ENST00000429083 425 ntBASIC25.01■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.01■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 MIR6765-201ENST00000614092 87 ntBASIC25■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.99■■□□□ 1.59
SYNJ2BP-COX16A0A087WUM0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms