Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 AC103724.3-201ENST00000564481 992 ntBASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CSNK1G3Q9Y6M4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G3Q9Y6M4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
CSNK1G3Q9Y6M4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.74■■□□□ 1.39
CSNK1G3Q9Y6M4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G3Q9Y6M4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G3Q9Y6M4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.74■■□□□ 1.39
CSNK1G3Q9Y6M4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G3Q9Y6M4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.74■■□□□ 1.39
CSNK1G3Q9Y6M4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G3Q9Y6M4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 LONRF2P2-201ENST00000439212 571 ntBASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 AL031848.2-201ENST00000607670 837 ntBASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.73■■□□□ 1.39
CSNK1G3Q9Y6M4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G3Q9Y6M4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G3Q9Y6M4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G3Q9Y6M4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G3Q9Y6M4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CSNK1G3Q9Y6M4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G3Q9Y6M4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G3Q9Y6M4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G3Q9Y6M4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G3Q9Y6M4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G3Q9Y6M4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G3Q9Y6M4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G3Q9Y6M4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G3Q9Y6M4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CSNK1G3Q9Y6M4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G3Q9Y6M4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
CSNK1G3Q9Y6M4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G3Q9Y6M4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.69■■□□□ 1.38
CSNK1G3Q9Y6M4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CSNK1G3Q9Y6M4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CSNK1G3Q9Y6M4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CSNK1G3Q9Y6M4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.69■■□□□ 1.38
CSNK1G3Q9Y6M4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSNK1G3Q9Y6M4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSNK1G3Q9Y6M4 AC142086.6-201ENST00000621154 1765 ntBASIC23.68■■□□□ 1.38
CSNK1G3Q9Y6M4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G3Q9Y6M4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G3Q9Y6M4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G3Q9Y6M4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G3Q9Y6M4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G3Q9Y6M4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.67■■□□□ 1.38
CSNK1G3Q9Y6M4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.66■■□□□ 1.38
CSNK1G3Q9Y6M4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSNK1G3Q9Y6M4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CSNK1G3Q9Y6M4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSNK1G3Q9Y6M4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
CSNK1G3Q9Y6M4 GUSBP5-201ENST00000418136 578 ntBASIC23.66■■□□□ 1.38
CSNK1G3Q9Y6M4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.66■■□□□ 1.38
CSNK1G3Q9Y6M4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.66■■□□□ 1.38
CSNK1G3Q9Y6M4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G3Q9Y6M4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CSNK1G3Q9Y6M4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.65■■□□□ 1.38
CSNK1G3Q9Y6M4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G3Q9Y6M4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CSNK1G3Q9Y6M4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CSNK1G3Q9Y6M4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CSNK1G3Q9Y6M4 AC022616.5-201ENST00000518796 181 ntBASIC23.64■■□□□ 1.37
CSNK1G3Q9Y6M4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.64■■□□□ 1.37
CSNK1G3Q9Y6M4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.64■■□□□ 1.37
CSNK1G3Q9Y6M4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSNK1G3Q9Y6M4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSNK1G3Q9Y6M4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSNK1G3Q9Y6M4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms