Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH20Q9HBT6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CDH20Q9HBT6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDH20Q9HBT6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH20Q9HBT6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH20Q9HBT6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH20Q9HBT6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH20Q9HBT6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH20Q9HBT6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CDH20Q9HBT6 AC133552.2-201ENST00000619106 1032 ntBASIC21.05■□□□□ 0.96
CDH20Q9HBT6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH20Q9HBT6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH20Q9HBT6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH20Q9HBT6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH20Q9HBT6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.04■□□□□ 0.96
CDH20Q9HBT6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.04■□□□□ 0.96
CDH20Q9HBT6 AC026202.3-201ENST00000600805 1127 ntBASIC21.04■□□□□ 0.96
CDH20Q9HBT6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH20Q9HBT6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH20Q9HBT6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH20Q9HBT6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH20Q9HBT6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH20Q9HBT6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH20Q9HBT6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CDH20Q9HBT6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH20Q9HBT6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH20Q9HBT6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH20Q9HBT6 AC009831.1-201ENST00000580420 1582 ntBASIC21.02■□□□□ 0.96
CDH20Q9HBT6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH20Q9HBT6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH20Q9HBT6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH20Q9HBT6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH20Q9HBT6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH20Q9HBT6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.02■□□□□ 0.95
CDH20Q9HBT6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDH20Q9HBT6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH20Q9HBT6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH20Q9HBT6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH20Q9HBT6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH20Q9HBT6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.01■□□□□ 0.95
CDH20Q9HBT6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH20Q9HBT6 RAP2CP1-202ENST00000605179 643 ntBASIC21.01■□□□□ 0.95
CDH20Q9HBT6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH20Q9HBT6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH20Q9HBT6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH20Q9HBT6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21■□□□□ 0.95
CDH20Q9HBT6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH20Q9HBT6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH20Q9HBT6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CDH20Q9HBT6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDH20Q9HBT6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH20Q9HBT6 U85056.1-201ENST00000616429 682 ntBASIC20.99■□□□□ 0.95
CDH20Q9HBT6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH20Q9HBT6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH20Q9HBT6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH20Q9HBT6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH20Q9HBT6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH20Q9HBT6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH20Q9HBT6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH20Q9HBT6 NTF6A-201ENST00000591175 560 ntBASIC20.98■□□□□ 0.95
CDH20Q9HBT6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH20Q9HBT6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH20Q9HBT6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH20Q9HBT6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH20Q9HBT6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH20Q9HBT6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDH20Q9HBT6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH20Q9HBT6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH20Q9HBT6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH20Q9HBT6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
CDH20Q9HBT6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDH20Q9HBT6 AL592293.1-201ENST00000502889 1188 ntBASIC20.96■□□□□ 0.95
CDH20Q9HBT6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH20Q9HBT6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH20Q9HBT6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH20Q9HBT6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH20Q9HBT6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.94■□□□□ 0.94
CDH20Q9HBT6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.94■□□□□ 0.94
CDH20Q9HBT6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH20Q9HBT6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH20Q9HBT6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms