Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.52■■■□□ 2.48
SH3TC1Q8TE82 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SH3TC1Q8TE82 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
SH3TC1Q8TE82 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SH3TC1Q8TE82 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
SH3TC1Q8TE82 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
SH3TC1Q8TE82 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SH3TC1Q8TE82 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SH3TC1Q8TE82 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SH3TC1Q8TE82 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
SH3TC1Q8TE82 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SH3TC1Q8TE82 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
SH3TC1Q8TE82 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SH3TC1Q8TE82 RPS2P7-201ENST00000447334 885 ntBASIC30.5■■■□□ 2.47
SH3TC1Q8TE82 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SH3TC1Q8TE82 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.5■■■□□ 2.47
SH3TC1Q8TE82 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
SH3TC1Q8TE82 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SH3TC1Q8TE82 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.49■■■□□ 2.47
SH3TC1Q8TE82 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SH3TC1Q8TE82 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SH3TC1Q8TE82 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SH3TC1Q8TE82 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SH3TC1Q8TE82 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SH3TC1Q8TE82 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
SH3TC1Q8TE82 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.47■■■□□ 2.47
SH3TC1Q8TE82 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SH3TC1Q8TE82 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.47■■■□□ 2.47
SH3TC1Q8TE82 AL031848.2-201ENST00000607670 837 ntBASIC30.47■■■□□ 2.47
SH3TC1Q8TE82 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.46■■■□□ 2.47
SH3TC1Q8TE82 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.46■■■□□ 2.47
SH3TC1Q8TE82 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
SH3TC1Q8TE82 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SH3TC1Q8TE82 LONRF2P2-201ENST00000439212 571 ntBASIC30.45■■■□□ 2.46
SH3TC1Q8TE82 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
SH3TC1Q8TE82 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
SH3TC1Q8TE82 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SH3TC1Q8TE82 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.44■■■□□ 2.46
SH3TC1Q8TE82 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
SH3TC1Q8TE82 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.44■■■□□ 2.46
SH3TC1Q8TE82 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.44■■■□□ 2.46
SH3TC1Q8TE82 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.44■■■□□ 2.46
SH3TC1Q8TE82 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.44■■■□□ 2.46
SH3TC1Q8TE82 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SH3TC1Q8TE82 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SH3TC1Q8TE82 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
SH3TC1Q8TE82 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
SH3TC1Q8TE82 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.42■■■□□ 2.46
SH3TC1Q8TE82 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.42■■■□□ 2.46
SH3TC1Q8TE82 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SH3TC1Q8TE82 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.42■■■□□ 2.46
SH3TC1Q8TE82 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SH3TC1Q8TE82 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.42■■■□□ 2.46
SH3TC1Q8TE82 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SH3TC1Q8TE82 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
SH3TC1Q8TE82 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
SH3TC1Q8TE82 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SH3TC1Q8TE82 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
SH3TC1Q8TE82 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.41■■■□□ 2.46
SH3TC1Q8TE82 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
SH3TC1Q8TE82 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SH3TC1Q8TE82 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
SH3TC1Q8TE82 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 BX255925.1-201ENST00000566954 1854 ntBASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SH3TC1Q8TE82 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC1Q8TE82 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC1Q8TE82 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC1Q8TE82 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.38■■■□□ 2.45
SH3TC1Q8TE82 GUSBP5-201ENST00000418136 578 ntBASIC30.38■■■□□ 2.45
SH3TC1Q8TE82 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.38■■■□□ 2.45
SH3TC1Q8TE82 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC1Q8TE82 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC1Q8TE82 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
SH3TC1Q8TE82 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SH3TC1Q8TE82 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SH3TC1Q8TE82 AC142472.1-201ENST00000612013 1741 ntBASIC30.37■■■□□ 2.45
SH3TC1Q8TE82 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SH3TC1Q8TE82 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC1Q8TE82 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.36■■■□□ 2.45
SH3TC1Q8TE82 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.36■■■□□ 2.45
SH3TC1Q8TE82 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC1Q8TE82 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
SH3TC1Q8TE82 KRT18P10-201ENST00000388836 1287 ntBASIC30.35■■■□□ 2.45
SH3TC1Q8TE82 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.35■■■□□ 2.45
SH3TC1Q8TE82 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
SH3TC1Q8TE82 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SH3TC1Q8TE82 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.34■■■□□ 2.45
SH3TC1Q8TE82 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.34■■■□□ 2.45
SH3TC1Q8TE82 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
SH3TC1Q8TE82 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SH3TC1Q8TE82 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms