Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.65■■□□□ 1.22
CHD6Q8TD26 IKBKGP1-201ENST00000612193 1073 ntBASIC22.65■■□□□ 1.22
CHD6Q8TD26 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
CHD6Q8TD26 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.65■■□□□ 1.22
CHD6Q8TD26 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD6Q8TD26 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CHD6Q8TD26 ABHD17AP1-201ENST00000358206 933 ntBASIC22.65■■□□□ 1.22
CHD6Q8TD26 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD6Q8TD26 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CHD6Q8TD26 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD6Q8TD26 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.64■■□□□ 1.21
CHD6Q8TD26 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.64■■□□□ 1.21
CHD6Q8TD26 AC022517.1-201ENST00000592429 346 ntBASIC22.64■■□□□ 1.21
CHD6Q8TD26 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CHD6Q8TD26 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD6Q8TD26 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD6Q8TD26 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD6Q8TD26 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD6Q8TD26 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD6Q8TD26 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
CHD6Q8TD26 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD6Q8TD26 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CHD6Q8TD26 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD6Q8TD26 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD6Q8TD26 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD6Q8TD26 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.61■■□□□ 1.21
CHD6Q8TD26 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.61■■□□□ 1.21
CHD6Q8TD26 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.61■■□□□ 1.21
CHD6Q8TD26 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD6Q8TD26 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.6■■□□□ 1.21
CHD6Q8TD26 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD6Q8TD26 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD6Q8TD26 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD6Q8TD26 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.59■■□□□ 1.21
CHD6Q8TD26 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD6Q8TD26 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CHD6Q8TD26 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD6Q8TD26 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD6Q8TD26 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.59■■□□□ 1.21
CHD6Q8TD26 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.59■■□□□ 1.21
CHD6Q8TD26 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHD6Q8TD26 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CHD6Q8TD26 AC010997.5-201ENST00000609182 354 ntBASIC22.58■■□□□ 1.21
CHD6Q8TD26 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.58■■□□□ 1.21
CHD6Q8TD26 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
CHD6Q8TD26 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CHD6Q8TD26 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CHD6Q8TD26 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD6Q8TD26 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.57■■□□□ 1.2
CHD6Q8TD26 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD6Q8TD26 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHD6Q8TD26 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.57■■□□□ 1.2
CHD6Q8TD26 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.57■■□□□ 1.2
CHD6Q8TD26 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.57■■□□□ 1.2
CHD6Q8TD26 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHD6Q8TD26 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD6Q8TD26 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD6Q8TD26 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD6Q8TD26 AC092437.1-201ENST00000624794 1048 ntBASIC22.56■■□□□ 1.2
CHD6Q8TD26 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CHD6Q8TD26 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CHD6Q8TD26 AL136967.2-201ENST00000623968 743 ntBASIC22.55■■□□□ 1.2
CHD6Q8TD26 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD6Q8TD26 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CHD6Q8TD26 MIR939-201ENST00000401314 82 ntBASIC22.54■■□□□ 1.2
CHD6Q8TD26 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CHD6Q8TD26 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHD6Q8TD26 AC024257.2-201ENST00000549699 147 ntBASIC22.54■■□□□ 1.2
CHD6Q8TD26 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD6Q8TD26 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.53■■□□□ 1.2
CHD6Q8TD26 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.53■■□□□ 1.2
CHD6Q8TD26 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD6Q8TD26 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD6Q8TD26 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD6Q8TD26 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CHD6Q8TD26 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD6Q8TD26 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.53■■□□□ 1.2
CHD6Q8TD26 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CHD6Q8TD26 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD6Q8TD26 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD6Q8TD26 UNC93B3-201ENST00000308076 687 ntBASIC22.52■■□□□ 1.2
CHD6Q8TD26 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.52■■□□□ 1.2
CHD6Q8TD26 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD6Q8TD26 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD6Q8TD26 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD6Q8TD26 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
CHD6Q8TD26 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD6Q8TD26 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD6Q8TD26 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.51■■□□□ 1.19
CHD6Q8TD26 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHD6Q8TD26 AF213884.3-201ENST00000563833 479 ntBASIC22.51■■□□□ 1.19
CHD6Q8TD26 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHD6Q8TD26 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.51■■□□□ 1.19
CHD6Q8TD26 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
CHD6Q8TD26 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.51■■□□□ 1.19
CHD6Q8TD26 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD6Q8TD26 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD6Q8TD26 SLC47A1P1-202ENST00000449666 945 ntBASIC22.49■■□□□ 1.19
CHD6Q8TD26 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHD6Q8TD26 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms