Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
SHKBP1Q8TBC3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SHKBP1Q8TBC3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SHKBP1Q8TBC3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SHKBP1Q8TBC3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SHKBP1Q8TBC3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.49■■□□□ 1.67
SHKBP1Q8TBC3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SHKBP1Q8TBC3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHKBP1Q8TBC3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.49■■□□□ 1.67
SHKBP1Q8TBC3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHKBP1Q8TBC3 AC009299.2-201ENST00000482477 511 ntBASIC25.49■■□□□ 1.67
SHKBP1Q8TBC3 MIR4508-201ENST00000584178 70 ntBASIC25.49■■□□□ 1.67
SHKBP1Q8TBC3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHKBP1Q8TBC3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
SHKBP1Q8TBC3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHKBP1Q8TBC3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SHKBP1Q8TBC3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SHKBP1Q8TBC3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SHKBP1Q8TBC3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHKBP1Q8TBC3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SHKBP1Q8TBC3 LINC01003-201ENST00000564834 1764 ntBASIC25.47■■□□□ 1.67
SHKBP1Q8TBC3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SHKBP1Q8TBC3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
SHKBP1Q8TBC3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHKBP1Q8TBC3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHKBP1Q8TBC3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.46■■□□□ 1.67
SHKBP1Q8TBC3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHKBP1Q8TBC3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHKBP1Q8TBC3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHKBP1Q8TBC3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
SHKBP1Q8TBC3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHKBP1Q8TBC3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHKBP1Q8TBC3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHKBP1Q8TBC3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.44■■□□□ 1.66
SHKBP1Q8TBC3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHKBP1Q8TBC3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.44■■□□□ 1.66
SHKBP1Q8TBC3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHKBP1Q8TBC3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
SHKBP1Q8TBC3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHKBP1Q8TBC3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHKBP1Q8TBC3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHKBP1Q8TBC3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.43■■□□□ 1.66
SHKBP1Q8TBC3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
SHKBP1Q8TBC3 AC087393.1-201ENST00000582896 145 ntBASIC25.43■■□□□ 1.66
SHKBP1Q8TBC3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SHKBP1Q8TBC3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHKBP1Q8TBC3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHKBP1Q8TBC3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SHKBP1Q8TBC3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.42■■□□□ 1.66
SHKBP1Q8TBC3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHKBP1Q8TBC3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SHKBP1Q8TBC3 AC103724.3-201ENST00000564481 992 ntBASIC25.41■■□□□ 1.66
SHKBP1Q8TBC3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SHKBP1Q8TBC3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHKBP1Q8TBC3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHKBP1Q8TBC3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHKBP1Q8TBC3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHKBP1Q8TBC3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHKBP1Q8TBC3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHKBP1Q8TBC3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHKBP1Q8TBC3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHKBP1Q8TBC3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHKBP1Q8TBC3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHKBP1Q8TBC3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SHKBP1Q8TBC3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SHKBP1Q8TBC3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SHKBP1Q8TBC3 RPS2P7-201ENST00000447334 885 ntBASIC25.39■■□□□ 1.66
SHKBP1Q8TBC3 AC019171.1-201ENST00000601251 1056 ntBASIC25.39■■□□□ 1.66
SHKBP1Q8TBC3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
SHKBP1Q8TBC3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHKBP1Q8TBC3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SHKBP1Q8TBC3 AC135731.1-201ENST00000569415 2548 ntBASIC25.38■■□□□ 1.65
SHKBP1Q8TBC3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHKBP1Q8TBC3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SHKBP1Q8TBC3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SHKBP1Q8TBC3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SHKBP1Q8TBC3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
SHKBP1Q8TBC3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SHKBP1Q8TBC3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SHKBP1Q8TBC3 AL121749.1-202ENST00000609313 2153 ntBASIC25.37■■□□□ 1.65
SHKBP1Q8TBC3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SHKBP1Q8TBC3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.36■■□□□ 1.65
SHKBP1Q8TBC3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.36■■□□□ 1.65
SHKBP1Q8TBC3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SHKBP1Q8TBC3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SHKBP1Q8TBC3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.35■■□□□ 1.65
SHKBP1Q8TBC3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
SHKBP1Q8TBC3 AL031848.2-201ENST00000607670 837 ntBASIC25.35■■□□□ 1.65
SHKBP1Q8TBC3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHKBP1Q8TBC3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
SHKBP1Q8TBC3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SHKBP1Q8TBC3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.34■■□□□ 1.65
SHKBP1Q8TBC3 LONRF2P2-201ENST00000439212 571 ntBASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms