Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1AP38936 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1AP38936 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1AP38936 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN1AP38936 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDKN1AP38936 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN1AP38936 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1AP38936 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDKN1AP38936 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.65■□□□□ 0.9
CDKN1AP38936 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1AP38936 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDKN1AP38936 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKN1AP38936 AC087393.1-201ENST00000582896 145 ntBASIC20.65■□□□□ 0.9
CDKN1AP38936 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKN1AP38936 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.65■□□□□ 0.9
CDKN1AP38936 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1AP38936 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN1AP38936 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.64■□□□□ 0.89
CDKN1AP38936 AC135731.1-201ENST00000569415 2548 ntBASIC20.64■□□□□ 0.89
CDKN1AP38936 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN1AP38936 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CDKN1AP38936 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.63■□□□□ 0.89
CDKN1AP38936 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN1AP38936 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDKN1AP38936 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.63■□□□□ 0.89
CDKN1AP38936 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.63■□□□□ 0.89
CDKN1AP38936 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN1AP38936 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN1AP38936 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN1AP38936 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN1AP38936 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN1AP38936 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN1AP38936 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDKN1AP38936 RPS2P7-201ENST00000447334 885 ntBASIC20.62■□□□□ 0.89
CDKN1AP38936 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.62■□□□□ 0.89
CDKN1AP38936 AC131212.1-201ENST00000613771 668 ntBASIC20.62■□□□□ 0.89
CDKN1AP38936 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN1AP38936 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDKN1AP38936 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN1AP38936 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN1AP38936 GUSBP5-201ENST00000418136 578 ntBASIC20.61■□□□□ 0.89
CDKN1AP38936 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
CDKN1AP38936 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN1AP38936 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDKN1AP38936 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN1AP38936 LINC01003-201ENST00000564834 1764 ntBASIC20.61■□□□□ 0.89
CDKN1AP38936 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN1AP38936 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN1AP38936 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.6■□□□□ 0.89
CDKN1AP38936 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN1AP38936 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN1AP38936 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CDKN1AP38936 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN1AP38936 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN1AP38936 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN1AP38936 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKN1AP38936 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDKN1AP38936 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN1AP38936 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.59■□□□□ 0.89
CDKN1AP38936 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN1AP38936 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN1AP38936 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN1AP38936 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKN1AP38936 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.59■□□□□ 0.89
CDKN1AP38936 AC019171.1-201ENST00000601251 1056 ntBASIC20.59■□□□□ 0.89
CDKN1AP38936 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDKN1AP38936 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN1AP38936 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDKN1AP38936 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
CDKN1AP38936 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDKN1AP38936 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN1AP38936 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.58■□□□□ 0.89
CDKN1AP38936 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN1AP38936 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN1AP38936 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDKN1AP38936 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKN1AP38936 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKN1AP38936 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKN1AP38936 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDKN1AP38936 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN1AP38936 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN1AP38936 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDKN1AP38936 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKN1AP38936 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.57■□□□□ 0.88
CDKN1AP38936 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN1AP38936 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN1AP38936 THA1P-201ENST00000590384 1145 ntBASIC20.57■□□□□ 0.88
CDKN1AP38936 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN1AP38936 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CDKN1AP38936 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKN1AP38936 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN1AP38936 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CDKN1AP38936 AL592295.1-201ENST00000400984 884 ntBASIC20.56■□□□□ 0.88
CDKN1AP38936 LONRF2P2-201ENST00000439212 571 ntBASIC20.56■□□□□ 0.88
CDKN1AP38936 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKN1AP38936 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN1AP38936 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN1AP38936 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN1AP38936 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN1AP38936 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms