Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNYL3P0C7X3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNYL3P0C7X3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.25■■□□□ 1.31
CCNYL3P0C7X3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CCNYL3P0C7X3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNYL3P0C7X3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNYL3P0C7X3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNYL3P0C7X3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.24■■□□□ 1.31
CCNYL3P0C7X3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CCNYL3P0C7X3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CCNYL3P0C7X3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCNYL3P0C7X3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCNYL3P0C7X3 SPCS2P3-201ENST00000500401 656 ntBASIC23.23■■□□□ 1.31
CCNYL3P0C7X3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCNYL3P0C7X3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNYL3P0C7X3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.22■■□□□ 1.31
CCNYL3P0C7X3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.22■■□□□ 1.31
CCNYL3P0C7X3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.22■■□□□ 1.31
CCNYL3P0C7X3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNYL3P0C7X3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.22■■□□□ 1.31
CCNYL3P0C7X3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.22■■□□□ 1.31
CCNYL3P0C7X3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCNYL3P0C7X3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNYL3P0C7X3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNYL3P0C7X3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNYL3P0C7X3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNYL3P0C7X3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCNYL3P0C7X3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CCNYL3P0C7X3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.21■■□□□ 1.31
CCNYL3P0C7X3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNYL3P0C7X3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCNYL3P0C7X3 AC010980.1-201ENST00000587192 1142 ntBASIC23.2■■□□□ 1.3
CCNYL3P0C7X3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCNYL3P0C7X3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNYL3P0C7X3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCNYL3P0C7X3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNYL3P0C7X3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNYL3P0C7X3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.19■■□□□ 1.3
CCNYL3P0C7X3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCNYL3P0C7X3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CCNYL3P0C7X3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNYL3P0C7X3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNYL3P0C7X3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNYL3P0C7X3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.18■■□□□ 1.3
CCNYL3P0C7X3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNYL3P0C7X3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNYL3P0C7X3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNYL3P0C7X3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNYL3P0C7X3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNYL3P0C7X3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.17■■□□□ 1.3
CCNYL3P0C7X3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.17■■□□□ 1.3
CCNYL3P0C7X3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.17■■□□□ 1.3
CCNYL3P0C7X3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCNYL3P0C7X3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.17■■□□□ 1.3
CCNYL3P0C7X3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
CCNYL3P0C7X3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNYL3P0C7X3 YBX1P4-201ENST00000392794 808 ntBASIC23.16■■□□□ 1.3
CCNYL3P0C7X3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCNYL3P0C7X3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCNYL3P0C7X3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCNYL3P0C7X3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.15■■□□□ 1.3
CCNYL3P0C7X3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CCNYL3P0C7X3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCNYL3P0C7X3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCNYL3P0C7X3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCNYL3P0C7X3 KRT8P33-201ENST00000508125 1423 ntBASIC23.15■■□□□ 1.3
CCNYL3P0C7X3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCNYL3P0C7X3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNYL3P0C7X3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNYL3P0C7X3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNYL3P0C7X3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCNYL3P0C7X3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCNYL3P0C7X3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCNYL3P0C7X3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCNYL3P0C7X3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.13■■□□□ 1.29
CCNYL3P0C7X3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.13■■□□□ 1.29
CCNYL3P0C7X3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.13■■□□□ 1.29
CCNYL3P0C7X3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CCNYL3P0C7X3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNYL3P0C7X3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
CCNYL3P0C7X3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.12■■□□□ 1.29
CCNYL3P0C7X3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNYL3P0C7X3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CCNYL3P0C7X3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNYL3P0C7X3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCNYL3P0C7X3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCNYL3P0C7X3 AL035685.1-201ENST00000636663 812 ntBASIC23.11■■□□□ 1.29
CCNYL3P0C7X3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.11■■□□□ 1.29
CCNYL3P0C7X3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNYL3P0C7X3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.1■■□□□ 1.29
CCNYL3P0C7X3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.1■■□□□ 1.29
CCNYL3P0C7X3 AL451085.2-201ENST00000605085 799 ntBASIC23.1■■□□□ 1.29
CCNYL3P0C7X3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CCNYL3P0C7X3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCNYL3P0C7X3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCNYL3P0C7X3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNYL3P0C7X3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNYL3P0C7X3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCNYL3P0C7X3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNYL3P0C7X3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms