Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LYRM1O43325 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LYRM1O43325 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LYRM1O43325 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LYRM1O43325 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.78■□□□□ 0.92
LYRM1O43325 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LYRM1O43325 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LYRM1O43325 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.77■□□□□ 0.92
LYRM1O43325 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LYRM1O43325 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYRM1O43325 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYRM1O43325 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.76■□□□□ 0.91
LYRM1O43325 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.76■□□□□ 0.91
LYRM1O43325 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.76■□□□□ 0.91
LYRM1O43325 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYRM1O43325 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYRM1O43325 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYRM1O43325 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYRM1O43325 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.75■□□□□ 0.91
LYRM1O43325 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.75■□□□□ 0.91
LYRM1O43325 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LYRM1O43325 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYRM1O43325 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYRM1O43325 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYRM1O43325 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
LYRM1O43325 DUSP8P5-201ENST00000422884 1815 ntBASIC20.74■□□□□ 0.91
LYRM1O43325 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.74■□□□□ 0.91
LYRM1O43325 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LYRM1O43325 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYRM1O43325 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYRM1O43325 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYRM1O43325 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.73■□□□□ 0.91
LYRM1O43325 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.73■□□□□ 0.91
LYRM1O43325 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYRM1O43325 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LYRM1O43325 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.73■□□□□ 0.91
LYRM1O43325 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYRM1O43325 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.73■□□□□ 0.91
LYRM1O43325 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.72■□□□□ 0.91
LYRM1O43325 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.72■□□□□ 0.91
LYRM1O43325 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 AC096887.2-201ENST00000623443 1957 ntBASIC20.72■□□□□ 0.91
LYRM1O43325 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYRM1O43325 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYRM1O43325 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.71■□□□□ 0.91
LYRM1O43325 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYRM1O43325 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYRM1O43325 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LYRM1O43325 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYRM1O43325 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYRM1O43325 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYRM1O43325 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYRM1O43325 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYRM1O43325 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYRM1O43325 WHAMMP2-203ENST00000563942 1603 ntBASIC20.7■□□□□ 0.9
LYRM1O43325 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYRM1O43325 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LYRM1O43325 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYRM1O43325 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYRM1O43325 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.69■□□□□ 0.9
LYRM1O43325 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYRM1O43325 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LYRM1O43325 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYRM1O43325 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYRM1O43325 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYRM1O43325 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYRM1O43325 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYRM1O43325 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
LYRM1O43325 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYRM1O43325 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYRM1O43325 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LYRM1O43325 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYRM1O43325 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.68■□□□□ 0.9
LYRM1O43325 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LYRM1O43325 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYRM1O43325 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.67■□□□□ 0.9
LYRM1O43325 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYRM1O43325 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYRM1O43325 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYRM1O43325 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYRM1O43325 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYRM1O43325 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.66■□□□□ 0.9
LYRM1O43325 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.66■□□□□ 0.9
LYRM1O43325 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYRM1O43325 AP003733.4-201ENST00000623785 1697 ntBASIC20.66■□□□□ 0.9
LYRM1O43325 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
LYRM1O43325 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYRM1O43325 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LYRM1O43325 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYRM1O43325 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYRM1O43325 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms