Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 DUX4L18-201ENST00000553347 1267 ntBASIC24.76■■□□□ 1.55
FNDC3AQ9Y2H6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
FNDC3AQ9Y2H6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
FNDC3AQ9Y2H6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
FNDC3AQ9Y2H6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.76■■□□□ 1.55
FNDC3AQ9Y2H6 AC009831.1-201ENST00000580420 1582 ntBASIC24.76■■□□□ 1.55
FNDC3AQ9Y2H6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.75■■□□□ 1.55
FNDC3AQ9Y2H6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
FNDC3AQ9Y2H6 AL592293.1-201ENST00000502889 1188 ntBASIC24.75■■□□□ 1.55
FNDC3AQ9Y2H6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.75■■□□□ 1.55
FNDC3AQ9Y2H6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.75■■□□□ 1.55
FNDC3AQ9Y2H6 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
FNDC3AQ9Y2H6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
FNDC3AQ9Y2H6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FNDC3AQ9Y2H6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
FNDC3AQ9Y2H6 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.74■■□□□ 1.55
FNDC3AQ9Y2H6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FNDC3AQ9Y2H6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
FNDC3AQ9Y2H6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
FNDC3AQ9Y2H6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
FNDC3AQ9Y2H6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.74■■□□□ 1.55
FNDC3AQ9Y2H6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
FNDC3AQ9Y2H6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.73■■□□□ 1.55
FNDC3AQ9Y2H6 AC133552.2-201ENST00000619106 1032 ntBASIC24.73■■□□□ 1.55
FNDC3AQ9Y2H6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.73■■□□□ 1.55
FNDC3AQ9Y2H6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.73■■□□□ 1.55
FNDC3AQ9Y2H6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.73■■□□□ 1.55
FNDC3AQ9Y2H6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
FNDC3AQ9Y2H6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.72■■□□□ 1.55
FNDC3AQ9Y2H6 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.72■■□□□ 1.55
FNDC3AQ9Y2H6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
FNDC3AQ9Y2H6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
FNDC3AQ9Y2H6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
FNDC3AQ9Y2H6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
FNDC3AQ9Y2H6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
FNDC3AQ9Y2H6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.71■■□□□ 1.55
FNDC3AQ9Y2H6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
FNDC3AQ9Y2H6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
FNDC3AQ9Y2H6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.71■■□□□ 1.55
FNDC3AQ9Y2H6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.71■■□□□ 1.55
FNDC3AQ9Y2H6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.7■■□□□ 1.54
FNDC3AQ9Y2H6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.7■■□□□ 1.54
FNDC3AQ9Y2H6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.7■■□□□ 1.54
FNDC3AQ9Y2H6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
FNDC3AQ9Y2H6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.7■■□□□ 1.54
FNDC3AQ9Y2H6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FNDC3AQ9Y2H6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
FNDC3AQ9Y2H6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
FNDC3AQ9Y2H6 AP004609.3-201ENST00000610705 1884 ntBASIC24.68■■□□□ 1.54
FNDC3AQ9Y2H6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.68■■□□□ 1.54
FNDC3AQ9Y2H6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
FNDC3AQ9Y2H6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
FNDC3AQ9Y2H6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
FNDC3AQ9Y2H6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
FNDC3AQ9Y2H6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
FNDC3AQ9Y2H6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
FNDC3AQ9Y2H6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FNDC3AQ9Y2H6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
FNDC3AQ9Y2H6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FNDC3AQ9Y2H6 SMPD5-203ENST00000639008 1464 ntBASIC24.66■■□□□ 1.54
FNDC3AQ9Y2H6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
FNDC3AQ9Y2H6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
FNDC3AQ9Y2H6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FNDC3AQ9Y2H6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
FNDC3AQ9Y2H6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FNDC3AQ9Y2H6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FNDC3AQ9Y2H6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FNDC3AQ9Y2H6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.65■■□□□ 1.54
FNDC3AQ9Y2H6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
FNDC3AQ9Y2H6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.64■■□□□ 1.54
FNDC3AQ9Y2H6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
FNDC3AQ9Y2H6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
FNDC3AQ9Y2H6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
FNDC3AQ9Y2H6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
FNDC3AQ9Y2H6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.64■■□□□ 1.54
FNDC3AQ9Y2H6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
FNDC3AQ9Y2H6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
FNDC3AQ9Y2H6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
FNDC3AQ9Y2H6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.63■■□□□ 1.53
FNDC3AQ9Y2H6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.63■■□□□ 1.53
FNDC3AQ9Y2H6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
FNDC3AQ9Y2H6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.62■■□□□ 1.53
FNDC3AQ9Y2H6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
FNDC3AQ9Y2H6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
FNDC3AQ9Y2H6 AC026202.3-201ENST00000600805 1127 ntBASIC24.62■■□□□ 1.53
FNDC3AQ9Y2H6 AL035685.1-201ENST00000636663 812 ntBASIC24.62■■□□□ 1.53
FNDC3AQ9Y2H6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
FNDC3AQ9Y2H6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
FNDC3AQ9Y2H6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.61■■□□□ 1.53
FNDC3AQ9Y2H6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FNDC3AQ9Y2H6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FNDC3AQ9Y2H6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
FNDC3AQ9Y2H6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.61■■□□□ 1.53
FNDC3AQ9Y2H6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.61■■□□□ 1.53
FNDC3AQ9Y2H6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
FNDC3AQ9Y2H6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
FNDC3AQ9Y2H6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
FNDC3AQ9Y2H6 AL451085.2-201ENST00000605085 799 ntBASIC24.6■■□□□ 1.53
FNDC3AQ9Y2H6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.6■■□□□ 1.53
FNDC3AQ9Y2H6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms