Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PACRGQ96M98 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PACRGQ96M98 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PACRGQ96M98 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACRGQ96M98 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACRGQ96M98 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACRGQ96M98 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACRGQ96M98 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACRGQ96M98 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACRGQ96M98 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
PACRGQ96M98 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PACRGQ96M98 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.39■□□□□ 0.53
PACRGQ96M98 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.39■□□□□ 0.53
PACRGQ96M98 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PACRGQ96M98 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PACRGQ96M98 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.39■□□□□ 0.53
PACRGQ96M98 SLC25A24-204ENST00000569674 2357 ntBASIC18.39■□□□□ 0.53
PACRGQ96M98 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PACRGQ96M98 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PACRGQ96M98 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.39■□□□□ 0.53
PACRGQ96M98 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PACRGQ96M98 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.38■□□□□ 0.53
PACRGQ96M98 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.38■□□□□ 0.53
PACRGQ96M98 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PACRGQ96M98 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PACRGQ96M98 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.38■□□□□ 0.53
PACRGQ96M98 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PACRGQ96M98 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PACRGQ96M98 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PACRGQ96M98 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.37■□□□□ 0.53
PACRGQ96M98 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.37■□□□□ 0.53
PACRGQ96M98 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PACRGQ96M98 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PACRGQ96M98 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PACRGQ96M98 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PACRGQ96M98 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.36■□□□□ 0.53
PACRGQ96M98 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PACRGQ96M98 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PACRGQ96M98 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PACRGQ96M98 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PACRGQ96M98 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PACRGQ96M98 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PACRGQ96M98 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.36■□□□□ 0.53
PACRGQ96M98 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PACRGQ96M98 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PACRGQ96M98 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACRGQ96M98 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PACRGQ96M98 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACRGQ96M98 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACRGQ96M98 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.35■□□□□ 0.53
PACRGQ96M98 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACRGQ96M98 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACRGQ96M98 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.35■□□□□ 0.53
PACRGQ96M98 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
PACRGQ96M98 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACRGQ96M98 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PACRGQ96M98 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACRGQ96M98 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.34■□□□□ 0.53
PACRGQ96M98 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PACRGQ96M98 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PACRGQ96M98 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACRGQ96M98 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PACRGQ96M98 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACRGQ96M98 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACRGQ96M98 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PACRGQ96M98 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PACRGQ96M98 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PACRGQ96M98 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PACRGQ96M98 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PACRGQ96M98 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PACRGQ96M98 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PACRGQ96M98 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PACRGQ96M98 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.33■□□□□ 0.53
PACRGQ96M98 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PACRGQ96M98 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PACRGQ96M98 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PACRGQ96M98 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PACRGQ96M98 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PACRGQ96M98 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PACRGQ96M98 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PACRGQ96M98 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PACRGQ96M98 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PACRGQ96M98 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACRGQ96M98 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PACRGQ96M98 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.32■□□□□ 0.52
PACRGQ96M98 PKD1P6-201ENST00000343738 4769 ntBASIC18.32■□□□□ 0.52
PACRGQ96M98 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
PACRGQ96M98 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACRGQ96M98 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACRGQ96M98 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACRGQ96M98 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
PACRGQ96M98 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACRGQ96M98 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.31■□□□□ 0.52
PACRGQ96M98 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACRGQ96M98 AC138932.3-201ENST00000567634 1902 ntBASIC18.31■□□□□ 0.52
PACRGQ96M98 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACRGQ96M98 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACRGQ96M98 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACRGQ96M98 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PACRGQ96M98 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 872.6 ms