Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC010980.1-201ENST00000587192 1142 ntBASIC26.03■■□□□ 1.76
VARS2Q5ST30 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
VARS2Q5ST30 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
VARS2Q5ST30 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
VARS2Q5ST30 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
VARS2Q5ST30 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
VARS2Q5ST30 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
VARS2Q5ST30 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
VARS2Q5ST30 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.02■■□□□ 1.76
VARS2Q5ST30 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
VARS2Q5ST30 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.02■■□□□ 1.76
VARS2Q5ST30 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
VARS2Q5ST30 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
VARS2Q5ST30 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
VARS2Q5ST30 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
VARS2Q5ST30 AC139795.1-202ENST00000500444 432 ntBASIC26.01■■□□□ 1.75
VARS2Q5ST30 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
VARS2Q5ST30 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
VARS2Q5ST30 AC074183.2-201ENST00000623112 922 ntBASIC26■■□□□ 1.75
VARS2Q5ST30 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26■■□□□ 1.75
VARS2Q5ST30 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26■■□□□ 1.75
VARS2Q5ST30 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
VARS2Q5ST30 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.99■■□□□ 1.75
VARS2Q5ST30 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.99■■□□□ 1.75
VARS2Q5ST30 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
VARS2Q5ST30 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
VARS2Q5ST30 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.98■■□□□ 1.75
VARS2Q5ST30 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
VARS2Q5ST30 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.98■■□□□ 1.75
VARS2Q5ST30 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
VARS2Q5ST30 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.97■■□□□ 1.75
VARS2Q5ST30 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
VARS2Q5ST30 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
VARS2Q5ST30 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
VARS2Q5ST30 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
VARS2Q5ST30 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
VARS2Q5ST30 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.97■■□□□ 1.75
VARS2Q5ST30 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
VARS2Q5ST30 AC142086.6-201ENST00000621154 1765 ntBASIC25.97■■□□□ 1.75
VARS2Q5ST30 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
VARS2Q5ST30 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
VARS2Q5ST30 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VARS2Q5ST30 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
VARS2Q5ST30 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
VARS2Q5ST30 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.95■■□□□ 1.74
VARS2Q5ST30 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.95■■□□□ 1.74
VARS2Q5ST30 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.95■■□□□ 1.74
VARS2Q5ST30 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.95■■□□□ 1.74
VARS2Q5ST30 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.94■■□□□ 1.74
VARS2Q5ST30 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VARS2Q5ST30 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VARS2Q5ST30 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.94■■□□□ 1.74
VARS2Q5ST30 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
VARS2Q5ST30 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.94■■□□□ 1.74
VARS2Q5ST30 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.94■■□□□ 1.74
VARS2Q5ST30 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
VARS2Q5ST30 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.93■■□□□ 1.74
VARS2Q5ST30 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
VARS2Q5ST30 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.93■■□□□ 1.74
VARS2Q5ST30 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.93■■□□□ 1.74
VARS2Q5ST30 PVT1_1.1-201ENST00000615125 194 ntBASIC25.93■■□□□ 1.74
VARS2Q5ST30 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.93■■□□□ 1.74
VARS2Q5ST30 KRT8P33-201ENST00000508125 1423 ntBASIC25.93■■□□□ 1.74
VARS2Q5ST30 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
VARS2Q5ST30 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.92■■□□□ 1.74
VARS2Q5ST30 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
VARS2Q5ST30 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
VARS2Q5ST30 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
VARS2Q5ST30 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.91■■□□□ 1.74
VARS2Q5ST30 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
VARS2Q5ST30 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
VARS2Q5ST30 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
VARS2Q5ST30 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.9■■□□□ 1.74
VARS2Q5ST30 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
VARS2Q5ST30 AC142472.1-201ENST00000612013 1741 ntBASIC25.9■■□□□ 1.74
VARS2Q5ST30 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
VARS2Q5ST30 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
VARS2Q5ST30 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
VARS2Q5ST30 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
VARS2Q5ST30 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.89■■□□□ 1.74
VARS2Q5ST30 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
VARS2Q5ST30 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
VARS2Q5ST30 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.89■■□□□ 1.73
VARS2Q5ST30 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
VARS2Q5ST30 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
VARS2Q5ST30 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VARS2Q5ST30 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.88■■□□□ 1.73
VARS2Q5ST30 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VARS2Q5ST30 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
VARS2Q5ST30 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
VARS2Q5ST30 AC103834.1-201ENST00000520383 144 ntBASIC25.87■■□□□ 1.73
VARS2Q5ST30 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VARS2Q5ST30 AL451085.2-201ENST00000605085 799 ntBASIC25.87■■□□□ 1.73
VARS2Q5ST30 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VARS2Q5ST30 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VARS2Q5ST30 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
VARS2Q5ST30 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VARS2Q5ST30 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.86■■□□□ 1.73
VARS2Q5ST30 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VARS2Q5ST30 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms