Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDCD4Q53EL6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDCD4Q53EL6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PDCD4Q53EL6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDCD4Q53EL6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDCD4Q53EL6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDCD4Q53EL6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.31■■□□□ 1.32
PDCD4Q53EL6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDCD4Q53EL6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PDCD4Q53EL6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.3■■□□□ 1.32
PDCD4Q53EL6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDCD4Q53EL6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDCD4Q53EL6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDCD4Q53EL6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDCD4Q53EL6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PDCD4Q53EL6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.29■■□□□ 1.32
PDCD4Q53EL6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDCD4Q53EL6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDCD4Q53EL6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDCD4Q53EL6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDCD4Q53EL6 AC142381.3-201ENST00000568208 1670 ntBASIC23.28■■□□□ 1.32
PDCD4Q53EL6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDCD4Q53EL6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDCD4Q53EL6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.28■■□□□ 1.32
PDCD4Q53EL6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDCD4Q53EL6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDCD4Q53EL6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PDCD4Q53EL6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
PDCD4Q53EL6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PDCD4Q53EL6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.27■■□□□ 1.32
PDCD4Q53EL6 LINC01971-201ENST00000617888 1048 ntBASIC23.27■■□□□ 1.32
PDCD4Q53EL6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDCD4Q53EL6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.31
PDCD4Q53EL6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.26■■□□□ 1.31
PDCD4Q53EL6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDCD4Q53EL6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDCD4Q53EL6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDCD4Q53EL6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
PDCD4Q53EL6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDCD4Q53EL6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDCD4Q53EL6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDCD4Q53EL6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDCD4Q53EL6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDCD4Q53EL6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
PDCD4Q53EL6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PDCD4Q53EL6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDCD4Q53EL6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDCD4Q53EL6 AC008813.1-201ENST00000536597 885 ntBASIC23.24■■□□□ 1.31
PDCD4Q53EL6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.24■■□□□ 1.31
PDCD4Q53EL6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.24■■□□□ 1.31
PDCD4Q53EL6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDCD4Q53EL6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.24■■□□□ 1.31
PDCD4Q53EL6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDCD4Q53EL6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDCD4Q53EL6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.23■■□□□ 1.31
PDCD4Q53EL6 DUX4L13-201ENST00000554103 1267 ntBASIC23.23■■□□□ 1.31
PDCD4Q53EL6 DUX4L15-201ENST00000611059 1267 ntBASIC23.23■■□□□ 1.31
PDCD4Q53EL6 DUX4L23-201ENST00000615195 1269 ntBASIC23.23■■□□□ 1.31
PDCD4Q53EL6 DUX4L24-201ENST00000617576 1269 ntBASIC23.23■■□□□ 1.31
PDCD4Q53EL6 DUX4L22-201ENST00000618238 1269 ntBASIC23.23■■□□□ 1.31
PDCD4Q53EL6 DUX4L20-201ENST00000619712 1269 ntBASIC23.23■■□□□ 1.31
PDCD4Q53EL6 DUX4L21-201ENST00000622058 1269 ntBASIC23.23■■□□□ 1.31
PDCD4Q53EL6 DUX4L10-201ENST00000622460 1267 ntBASIC23.23■■□□□ 1.31
PDCD4Q53EL6 DUX4L25-201ENST00000624915 1269 ntBASIC23.23■■□□□ 1.31
PDCD4Q53EL6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PDCD4Q53EL6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
PDCD4Q53EL6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PDCD4Q53EL6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDCD4Q53EL6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDCD4Q53EL6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDCD4Q53EL6 AC148477.6-201ENST00000623746 465 ntBASIC23.22■■□□□ 1.31
PDCD4Q53EL6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDCD4Q53EL6 MIR219A2-201ENST00000608502 1504 ntBASIC23.22■■□□□ 1.31
PDCD4Q53EL6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.22■■□□□ 1.31
PDCD4Q53EL6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDCD4Q53EL6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.21■■□□□ 1.31
PDCD4Q53EL6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDCD4Q53EL6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDCD4Q53EL6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDCD4Q53EL6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDCD4Q53EL6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDCD4Q53EL6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PDCD4Q53EL6 AC096887.2-201ENST00000623443 1957 ntBASIC23.21■■□□□ 1.31
PDCD4Q53EL6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDCD4Q53EL6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.2■■□□□ 1.3
PDCD4Q53EL6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.2■■□□□ 1.3
PDCD4Q53EL6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PDCD4Q53EL6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.19■■□□□ 1.3
PDCD4Q53EL6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDCD4Q53EL6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.19■■□□□ 1.3
PDCD4Q53EL6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDCD4Q53EL6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDCD4Q53EL6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDCD4Q53EL6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDCD4Q53EL6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PDCD4Q53EL6 AC022211.4-201ENST00000625094 2161 ntBASIC23.18■■□□□ 1.3
PDCD4Q53EL6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDCD4Q53EL6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDCD4Q53EL6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDCD4Q53EL6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms