Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB3DO95716 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB3DO95716 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB3DO95716 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB3DO95716 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB3DO95716 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB3DO95716 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB3DO95716 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RAB3DO95716 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB3DO95716 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RAB3DO95716 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB3DO95716 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.58■□□□□ 0.89
RAB3DO95716 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RAB3DO95716 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAB3DO95716 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB3DO95716 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB3DO95716 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB3DO95716 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB3DO95716 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB3DO95716 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB3DO95716 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB3DO95716 AC108673.1-201ENST00000510422 1159 ntBASIC20.57■□□□□ 0.88
RAB3DO95716 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.57■□□□□ 0.88
RAB3DO95716 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB3DO95716 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RAB3DO95716 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB3DO95716 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
RAB3DO95716 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3DO95716 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3DO95716 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3DO95716 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3DO95716 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3DO95716 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3DO95716 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
RAB3DO95716 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB3DO95716 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3DO95716 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3DO95716 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RAB3DO95716 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.55■□□□□ 0.88
RAB3DO95716 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3DO95716 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB3DO95716 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3DO95716 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RAB3DO95716 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3DO95716 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3DO95716 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3DO95716 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3DO95716 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3DO95716 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3DO95716 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3DO95716 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3DO95716 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3DO95716 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RAB3DO95716 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3DO95716 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3DO95716 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.53■□□□□ 0.88
RAB3DO95716 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAB3DO95716 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB3DO95716 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.53■□□□□ 0.88
RAB3DO95716 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3DO95716 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAB3DO95716 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3DO95716 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3DO95716 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RAB3DO95716 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3DO95716 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB3DO95716 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.51■□□□□ 0.87
RAB3DO95716 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB3DO95716 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3DO95716 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RAB3DO95716 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3DO95716 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3DO95716 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3DO95716 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3DO95716 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RAB3DO95716 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
RAB3DO95716 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB3DO95716 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB3DO95716 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB3DO95716 AC136428.2-201ENST00000563187 214 ntBASIC20.49■□□□□ 0.87
RAB3DO95716 MIR6090-201ENST00000622481 60 ntBASIC20.49■□□□□ 0.87
RAB3DO95716 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3DO95716 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB3DO95716 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3DO95716 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB3DO95716 AC133561.1-201ENST00000568600 2415 ntBASIC20.48■□□□□ 0.87
RAB3DO95716 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB3DO95716 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB3DO95716 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB3DO95716 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3DO95716 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3DO95716 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.47■□□□□ 0.87
RAB3DO95716 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3DO95716 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB3DO95716 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3DO95716 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB3DO95716 AC097358.2-201ENST00000607541 1159 ntBASIC20.47■□□□□ 0.87
RAB3DO95716 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3DO95716 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
RAB3DO95716 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms